Jump to navigation
Jump to search
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS01465 [old locus tag: SACOL0289 ]
- pan locus tag?: SAUPAN001212000
- symbol: SACOL_RS01465
- pan gene symbol?: —
- synonym:
- product: TIGR01741 family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS01465 [old locus tag: SACOL0289 ]
- symbol: SACOL_RS01465
- product: TIGR01741 family protein
- replicon: chromosome
- strand: +
- coordinates: 327492..327983
- length: 492
- essential: unknown
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481ATGACTTTCGAAGAAAAATTAAGTGAAATGTATAGCGAGATTGCGAATAAGATTATTAGC
ATGATACCGGTAGAGTGGGAAAAAGTATATGCAATGGCATATATCGATGAAGAATGTGGA
GAAGTGTTTTACAATTATACTGAACCAAGCAGTGATGAATTATTTTACTATACAAGTGTG
ATAAAGAAGTATAATTTATTGAAATCAAGCTTTATGGATTCAGTATATGAGTTGCATGAT
CAATTTGAGGAACTAAGAGAAGTATTTATAGAAGAAGGTCTTGAACCATGGACATCATGC
GAATTTGATTTTACAAAAGAAGATAAATTAAAAGTTTCATTTGATTATATTGATTGGATA
AATACAGAGTTTGATCAATTAGGCCGTGAAAATTATTATATGTACAAAAAATTTGGTGTT
TTACCAGAAACGGAATATGAAATTAATAAAGTTAAAGAAATCGAGCAATATATTAAAGAG
CAAGAAGAATAG60
120
180
240
300
360
420
480
492
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS01465 [old locus tag: SACOL0289 ]
- symbol: SACOL_RS01465
- description: TIGR01741 family protein
- length: 163
- theoretical pI: 3.95498
- theoretical MW: 19864.1
- GRAVY: -0.61227
⊟Function[edit | edit source]
- TIGRFAM: conserved hypothetical protein (TIGR01741; HMM-score: 275.7)
- TheSEED: see SACOL0289
- PFAM: no clan defined DUF600; Protein of unknown function, DUF600 (PF04634; HMM-score: 146.7)and 1 moreCBP4; CBP4 (PF07960; HMM-score: 13.5)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.015416
- TAT(Tat/SPI): 0.000409
- LIPO(Sec/SPII): 0.000888
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTFEEKLSEMYSEIANKIISMIPVEWEKVYAMAYIDEECGEVFYNYTEPSSDELFYYTSVIKKYNLLKSSFMDSVYELHDQFEELREVFIEEGLEPWTSCEFDFTKEDKLKVSFDYIDWINTEFDQLGRENYYMYKKFGVLPETEYEINKVKEIEQYIKEQEE
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.