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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS08055 [old locus tag: SACOL1581 ]
  • pan locus tag?: SAUPAN004099000
  • symbol: SACOL_RS08055
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS08055 [old locus tag: SACOL1581 ]
  • symbol: SACOL_RS08055
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1617469..1617729
  • length: 261
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (1617469..1617729) NCBI
  • BioCyc: SACOL_RS08055 BioCyc
  • MicrobesOnline: see SACOL1581

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    ATGAGTGGTTTATTTAATTTTTTTGTTTTAGGTGCTGACCGTCCATCACTTGGTGGAGTT
    GGTGACTGGATAAGTAATGAAGTAGGTACGGGTATTGGTTTAGTAGTATTGGTTGTTGGT
    ATTGTAAAATGGGCTAGTGGTAAATATGGGCATATGGTTATATTATTTGTTGTTGGTGGC
    TTTTTATTCTTAGTTTCTAAAGGTCCTGAACAGGTATTTAATGCGATTGCAGGTGTTTGG
    AAAATGATTTTTGGCGGTTGA
    60
    120
    180
    240
    261

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS08055 [old locus tag: SACOL1581 ]
  • symbol: SACOL_RS08055
  • description: hypothetical protein
  • length: 86
  • theoretical pI: 9.19081
  • theoretical MW: 9032.64
  • GRAVY: 0.947674

⊟Function[edit | edit source]

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 2
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.007615
    • TAT(Tat/SPI): 0.000229
    • LIPO(Sec/SPII): 0.004917
  • predicted transmembrane helices (TMHMM): 2

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSGLFNFFVLGADRPSLGGVGDWISNEVGTGIGLVVLVVGIVKWASGKYGHMVILFVVGGFLFLVSKGPEQVFNAIAGVWKMIFGG

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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