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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS11000 [old locus tag: SACOL2102 ]
  • pan locus tag?: SAUPAN005401000
  • symbol: SACOL_RS11000
  • pan gene symbol?: atpI
  • synonym:
  • product: ATP synthase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS11000 [old locus tag: SACOL2102 ]
  • symbol: SACOL_RS11000
  • product: ATP synthase
  • replicon: chromosome
  • strand: -
  • coordinates: 2163262..2163714
  • length: 453
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (2163262..2163714) NCBI
  • BioCyc: SACOL_RS11000 BioCyc
  • MicrobesOnline: see SACOL2102

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    TTGAATAGAATTGACACCACAAATCGCCTATATTATCATTTAGTTTGTATGAGTGGAACG
    GTTTTCATGATTGATATCAGTCACACGGAGGCATATAAAATGAGTCGTTTCTACAACATT
    TTTAAACAGTTCATTCAATATTATTTTTATCTAATAATAATATTGGGAGGATTATACCTT
    TATACACACCATGCATTTATCTTAGGATTAATCATTGGTGTTACTGGTTCTGCAATCAAC
    ACATGTATTTTTGAATGCTATTTAGCTAAAGCTAAAAGACCAGACACTATGCATATTTCA
    ACTGGAAATATGTGGCGATACTTAGTTGCAATTATTGCCTGTATGATTTGGTACCTTAAT
    AAAGCGCATGTAAGTATCATCGGTATAATTATTGGTTTAATGATTTCATATGTTGTAGTT
    ATCATACGTCCTTTACTAAAGGTGAGCAAATAA
    60
    120
    180
    240
    300
    360
    420
    453

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS11000 [old locus tag: SACOL2102 ]
  • symbol: SACOL_RS11000
  • description: ATP synthase
  • length: 150
  • theoretical pI: 9.57806
  • theoretical MW: 17393.9
  • GRAVY: 0.703333

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SACOL2102
  • PFAM:
    ATPase_I_AtpR (CL0478) ATP-synt_I; ATP synthase I chain (PF03899; HMM-score: 28.2)
    and 4 more
    no clan defined MNHE; Na+/H+ ion antiporter subunit (PF01899; HMM-score: 14.2)
    CopD_like (CL0430) DUF4149; Domain of unknown function (DUF4149) (PF13664; HMM-score: 10.1)
    no clan defined RRM_4; RNA recognition motif of the spliceosomal PrP8 (PF10598; HMM-score: 8.9)
    GNVR; G-rich domain on putative tyrosine kinase (PF13807; HMM-score: 8.7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.045313
    • TAT(Tat/SPI): 0.000388
    • LIPO(Sec/SPII): 0.015066
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MNRIDTTNRLYYHLVCMSGTVFMIDISHTEAYKMSRFYNIFKQFIQYYFYLIIILGGLYLYTHHAFILGLIIGVTGSAINTCIFECYLAKAKRPDTMHISTGNMWRYLVAIIACMIWYLNKAHVSIIGIIIGLMISYVVVIIRPLLKVSK

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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