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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS12500 [old locus tag: SACOL2382 ]
  • pan locus tag?: SAUPAN005911000
  • symbol: SACOL_RS12500
  • pan gene symbol?: gltT
  • synonym:
  • product: proton/sodium-glutamate symport protein GltT

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS12500 [old locus tag: SACOL2382 ]
  • symbol: SACOL_RS12500
  • product: proton/sodium-glutamate symport protein GltT
  • replicon: chromosome
  • strand: -
  • coordinates: 2441383..2442660
  • length: 1278
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (2441383..2442660) NCBI
  • BioCyc: SACOL_RS12500 BioCyc
  • MicrobesOnline: see SACOL2382

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGCTCTATTCAAGAGAAAAATTAGCCTACCTATGCAAGTTGTTATTGCATTAGTGTTA
    GGTGTTGTCGTAGGACTTTTATTATATGGACAAGAAAACGTAGCAAATTACATTAAACCA
    TTTGGTGACGTATTTTTAAATTTAATTAAAATGATCGTTATACCAGTTGTATTTTGCTCA
    CTAGCGCTTTCTATTTCGAACGTTGGGGAATCGAAAACTGTAGGGCGTTATGGCTGGAAA
    ACAATTTTATACTTTGAAATTATTACAACAATCGCAATAGGTTTAGGGATTATCTTCGGT
    AACCTATTTAAACCAGGTGCTGGATTAGACCCAACAAAATTACCTAAAGGTGATATTTCT
    AAATATCAATCAACTGCACATGCAGCAGAACAATCTACATATGGAAATCATTTTATTGAT
    ACCATTGTACATATTATTCCGACAAACTTTTTTGAAGCTTTAAATAAGGGTGAATTATTA
    CCTATTATCTTCTTCGCAGTATTCTTTGGATTAGGATTAGCTGCTGTAGGTAAAAAAGCA
    GAACCAGTTAAAGAATTTTTAAGCGGATCGCTTGAAGCTGTGTTCTGGATGATTAATAAA
    ATTTTAAAATTAGCACCACTTGGAGTGTTTGCATTCATTTGTACTACAATTATTACATTT
    GGTGCATCCGCATTATTACCACTATTAAAATTAGTATTAGTTGTTGTCTTTGCAATGGTG
    TTCTTTGTATTCGCTATACTAGGACTAGTTGCATGGATGTGTGGTATTAATATCATGAAT
    ATTATTAGAATCTTGAAAAGTGAATTGCTTTTAGCATTTTCTACATCAAGTTCGGAAGCT
    GTACTTCCTGTAATGATGAAGAAAATGGAAAACTTCGGTTCTCCAAAAGAAATTACTTCT
    TTTGTTATACCAATTGGTTATACGTTTAACTTAGATGGATCAGCACTTTATCAATCTATT
    GCAGCATTATTCGTTGCACAGATGTATGGAATGCACTTAACATTATCAGAGCAAATTGTG
    TTGATGTTAACATTAATGATTACGTCTAAAGGTATGGCGGCAGTACCAGGAACTTCAATC
    GTTGTTTTATTAACAACATTAGGTGCCATGGGCTTACCGGCACAAGGTTTAGCATTAATT
    ATTGGTGTTGACCGTATCTTAGATATGGTACGTACATGTGTAAACGTTATTGGTAATGCA
    TTATCAACAATCGTTATAGCTAAATGGGAAAACGTATATGACAAAGCAAAAGGTCAAGAA
    TATTTAAAATCAATTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1278

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS12500 [old locus tag: SACOL2382 ]
  • symbol: SACOL_RS12500
  • description: proton/sodium-glutamate symport protein GltT
  • length: 425
  • theoretical pI: 9.36462
  • theoretical MW: 46068.2
  • GRAVY: 0.874118

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SACOL2382
  • PFAM:
    no clan defined SDF; Sodium:dicarboxylate symporter family (PF00375; HMM-score: 410)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 7
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.050823
    • TAT(Tat/SPI): 0.000753
    • LIPO(Sec/SPII): 0.045106
  • predicted transmembrane helices (TMHMM): 8

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MALFKRKISLPMQVVIALVLGVVVGLLLYGQENVANYIKPFGDVFLNLIKMIVIPVVFCSLALSISNVGESKTVGRYGWKTILYFEIITTIAIGLGIIFGNLFKPGAGLDPTKLPKGDISKYQSTAHAAEQSTYGNHFIDTIVHIIPTNFFEALNKGELLPIIFFAVFFGLGLAAVGKKAEPVKEFLSGSLEAVFWMINKILKLAPLGVFAFICTTIITFGASALLPLLKLVLVVVFAMVFFVFAILGLVAWMCGINIMNIIRILKSELLLAFSTSSSEAVLPVMMKKMENFGSPKEITSFVIPIGYTFNLDGSALYQSIAALFVAQMYGMHLTLSEQIVLMLTLMITSKGMAAVPGTSIVVLLTTLGAMGLPAQGLALIIGVDRILDMVRTCVNVIGNALSTIVIAKWENVYDKAKGQEYLKSI

⊟Experimental data[edit | edit source]

  • experimentally validated: see SACOL2382
  • protein localization: see SACOL2382
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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