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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS12555 [old locus tag: SACOL2393 ]
  • pan locus tag?: SAUPAN005926000
  • symbol: SACOL_RS12555
  • pan gene symbol?: narJ
  • synonym:
  • product: nitrate reductase molybdenum cofactor assembly chaperone

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS12555 [old locus tag: SACOL2393 ]
  • symbol: SACOL_RS12555
  • product: nitrate reductase molybdenum cofactor assembly chaperone
  • replicon: chromosome
  • strand: -
  • coordinates: 2451108..2451698
  • length: 591
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (2451108..2451698) NCBI
  • BioCyc: SACOL_RS12555 BioCyc
  • MicrobesOnline: see SACOL2393

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
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    481
    541
    ATGGAGGGATTTTCCGTGATTAATTTCGATAATTTTAAAAAATATCAAGAAAGTTTTGGA
    TATATGGCACAACAGTTATGTTTTCCAGAAAAATTAACTTTTCATCCAAAAACTTTTGAA
    GAAACAATTTCGAAAGATCATCCAGCATATGAAGATTTAGTAGCATTTAGAAATGTAATG
    ATGACATTTTCATTATCAGAAATCAAAGCGATTTATACAGATACATTTGATTTTACGAAA
    AAAGCACCATTATATATGACGTATAACAAATTTGATACGCAAAAAGAACGTGGGCAAATG
    TTAGCTAAATTAAAGGTATTATATGAAATGTTTGGACTAGAAATGGTAGATAATGAACTT
    TCTGATTATCTACCGTTGATGCTTCAATTTTTGCAAGTGGCAGAATGGCGAAATGATCCA
    AGAGCTGAAGAGAATATTCAATTAATCATTATGATTATTGAGGATGGAACATATGTGATG
    GCGAATGCACTTGGTGAAGATAACAATCCATATGCCTATGTGATTCAAGCACTTAGAAAA
    ACATTGAAATTATGTTTGACATCACCAAAAGGAGTGAAACATCATGCTTAA
    60
    120
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    240
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    360
    420
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    540
    591

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS12555 [old locus tag: SACOL2393 ]
  • symbol: SACOL_RS12555
  • description: nitrate reductase molybdenum cofactor assembly chaperone
  • length: 196
  • theoretical pI: 5.09662
  • theoretical MW: 22925.3
  • GRAVY: -0.286735

⊟Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Protein fate Protein folding and stabilization nitrate reductase molybdenum cofactor assembly chaperone (TIGR00684; HMM-score: 65.6)
    and 1 more
    DMSO reductase family type II enzyme chaperone (TIGR03482; HMM-score: 26.6)
  • TheSEED: see SACOL2393
  • PFAM:
    no clan defined Nitrate_red_del; Nitrate reductase delta subunit (PF02613; HMM-score: 25.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003696
    • TAT(Tat/SPI): 0.000164
    • LIPO(Sec/SPII): 0.000675
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MEGFSVINFDNFKKYQESFGYMAQQLCFPEKLTFHPKTFEETISKDHPAYEDLVAFRNVMMTFSLSEIKAIYTDTFDFTKKAPLYMTYNKFDTQKERGQMLAKLKVLYEMFGLEMVDNELSDYLPLMLQFLQVAEWRNDPRAEENIQLIIMIIEDGTYVMANALGEDNNPYAYVIQALRKTLKLCLTSPKGVKHHA

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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