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NCBI: 10-JUN-2013

⊟Summary[edit | edit source]

organism: Staphylococcus aureus COL
locus tag: SACOL_tRNA-Trp-1 [new locus tag: SACOL_RS09905 ]
pan locus tag^?: SAUPAN004805000
symbol: SACOL_tRNA-Trp-1
pan gene symbol^?: trnaW
synonym:
product: tRNA-Trp

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

type: tRNA
locus tag: SACOL_tRNA-Trp-1 [new locus tag: SACOL_RS09905 ]
symbol: SACOL_tRNA-Trp-1
product: tRNA-Trp
replicon: chromosome
strand: -
coordinates: 1975116..1975189
length: 74
essential: unknown

⊟Accession numbers[edit | edit source]

Gene ID: 3236309 NCBI
RefSeq:
BioCyc: see SACOL_RS09905
MicrobesOnline: 913373 MicrobesOnline

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

1
61
AGGGGCATAGTTCAACGGTAGAATAGAGGTCTCCAAAACCTTTGGTGTGGGTTCGATTCC
TACTGCCCCTGCCA
60
74

⊟Protein[edit | edit source]

⊟General[edit | edit source]

locus tag: SACOL_tRNA-Trp-1 [new locus tag: SACOL_RS09905 ]
symbol: SACOL_tRNA-Trp-1
description: tRNA-Trp
length:
theoretical pI:
theoretical MW:
GRAVY:

⊟Function[edit | edit source]

TIGRFAM:
TheSEED:
PFAM:

⊟Structure, modifications & cofactors[edit | edit source]

domains:
modifications:
cofactors:
effectors:

⊟Localization[edit | edit source]

PSORTb:
LocateP:
SignalP:
predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

GI:
RefSeq:
UniProt:

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

experimentally validated:
protein localization:
quantitative data / protein copy number per cell:
interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

MicrobesOnline: SACOL_tRNA-Gly-2 < SACOL_tRNA-Cys-1 < SACOL_tRNA-Gln-1 < SACOL_tRNA-His-2 < SACOL_tRNA-Trp-1 < SACOL_tRNA-Tyr-1 < SACOL_tRNA-Thr-1 < SACOL_tRNA-Phe-2 < SACOL_tRNA-Asp-3 < SACOL_tRNA-Met-2 < SACOL_tRNA-Ser-4

⊟Regulation[edit | edit source]

regulator:

⊟Transcription pattern[edit | edit source]

S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

Aureolib: no data available

⊟Protein stability[edit | edit source]

half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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