From AureoWiki
Jump to navigation Jump to search

NCBI: 03-AUG-2016

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus NCTC8325
  • locus tag: SAOUHSC_02404
  • pan locus tag?: SAUPAN005501000
  • symbol: SAOUHSC_02404
  • pan gene symbol?: fmtB
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SAOUHSC_02404
  • symbol: SAOUHSC_02404
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2225123..2232559
  • length: 7437
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    4261
    4321
    4381
    4441
    4501
    4561
    4621
    4681
    4741
    4801
    4861
    4921
    4981
    5041
    5101
    5161
    5221
    5281
    5341
    5401
    5461
    5521
    5581
    5641
    5701
    5761
    5821
    5881
    5941
    6001
    6061
    6121
    6181
    6241
    6301
    6361
    6421
    6481
    6541
    6601
    6661
    6721
    6781
    6841
    6901
    6961
    7021
    7081
    7141
    7201
    7261
    7321
    7381
    ATGAATTTATTCAGACAACAAAAATTTAGTATCAGAAAATTTAATGTCGGTATTTTTTCA
    GCTTTAATTGCCACTGTTACTTTTATATCTACTAACCCGACAACAGCGTCTGCAGCAGAG
    CAAAATCAGCCTGCACAAAATCAACCAGCACAACCAGCTGATGCCAATACACAGCCTAAC
    GCAAATGCTGGTGCTCAAGCTAATCCTACAGCACAGCCAGCTGCACCTGCCAACCAAGGA
    CAACCAGCAGTACAACCAGCAAACCAAGGTGGACAGGCTAATCCAGCAGGAGGAGCAGCA
    CAACCAAATACACAACCAGCTGGACAAGGTGATCAAGCTGATCCGAATAACGCTGCACAA
    GCACAACCTGGAAATCAAGCAACACCGGCAAACCAAGCAGGTCAAGGAAATAACCAAGCA
    ACACCTAATAATAATGCAACACCGGCAAATCAAACACAGCCAGCGAATGCTCCAGCAGCA
    GCGCAACCAGCAGCACCTGTAGCAGCAAACGCACAAACTCAAGATCCAAATGCTAGCAAT
    ACTGGTGAAGGCAGTATTAATACGACATTAACATTTGATGATCCTGCCATATCAACAGAT
    GAGAATAGACAGGATCCAACTGTAACTGTTACAGATAAAGTAAATGGTTATTCATTAATT
    AACAACGGTAAGATTGGTTTCGTTAACTCAGAATTAAGACGAAGCGATATGTTTGATAAG
    AATAACCCTCAAAACTATCAAGCTAAAGGAAACGTGGCTGCATTAGGTCGTGTGAATGCA
    AATGATTCTACAGATCATGGTAACTTTAACGGTATTTCAAAAACTGTAAATGTAAAACCA
    GATTCAGAATTAATTATTAACTTTACTACTATGCAAACGAATAGTAAGCAAGGTGCAACA
    AATTTAGTTATTAAAGATGCTAAGAAAAATACTGAATTAGCAACTGTAAATGTTGCTAAG
    ACTGGTACTGCACATTTATTTAAAGTACCAACTGATGCTGATCGTTTAGATTTACAATTT
    ATTCCTGACAATACAGCAGTTGCTGATGCTTCAAGAATTACAACAAATAAAGATGGTTAT
    AAATACTATTCATTCATTGATAATGTAGGTCTATTCTCAGGATCACATTTATATGTCAAA
    AATAGAGATTTAGCACCGAAAGCAACTAACAATAAAGAATATACTATTAATACTGAAATC
    GGTAACAATGGTAATTTTGGTGCTTCATTAAAAGCAGATCAATTTAAATATGAAGTAACA
    TTACCACAAGGTGTAACTTACGTTAATAATTCATTAACTACAACATTCCCTAATGGTAAT
    GAAGACAGTACAGTATTGAAAAATATGACTGTTAATTATGATCAAAATGCAAATAAAGTT
    ACATTTACAAGCCAAGGTGTGACAACGGCACGTGGTACACACACTAAAGAAGTTTTATTC
    CCAGATAAATCTTTAAAATTATCATATAAAGTTAATGTTGCGAATATCGATACACCTAAA
    AATATTGATTTTAATGAAAAATTAACATATCGTACTGCTTCAGATGTTGTAATTAATAAT
    GCGCAACCAGAAGTTACACTAACTGCAGATCCATTTTCAGTAGCGGTTGAAATGAACAAA
    GATGCGTTGCAACAACAAGTAAACTCACAAGTTGATAATAGTCATTACACAACAGCATCA
    ATTGCAGAATACAATAAACTTAAACAACAAGCAGATACTATTTTAAATGAAGATGCGAAT
    CATGTTAAAACTGCAAATCGTGCATCTCAAGCGGATATTGATGGTTTAGTAACTAAATTA
    CAAGCTGCATTAATTGATAATCAAGCAGCAATTGCTGAATTAGATACTAAAGCTCAAGAA
    AAGGTTACAGCAGCACAACAAAGTAAAAAAGTTACGCAAGATGAAGTTGCAGCACTTGTA
    ACTAAAATTAACAATGATAAAAATAATGCAATCGCAGAAATTAATAAACAAACTACAGCA
    CAAGGTGTCACAACTGAAAAAGATAATGGTATCGCAGTGTTAGAACAAGATGTGATTACA
    CCAACAGTTAAACCTCAAGCGAAACAAGATATTATCCAAGCAGTTACAACTCGTAAACAA
    CAAATTAAAAAGTCAAATGCATCATTACAAGATGAAAAAGATGTAGCAAATGATAAAATT
    GGTAAAATTGAAACAAAGGCAATTAAAGATATTGATGCAGCAACAACAAATGCACAAGTA
    GAAGCCATTAAAACAAAAGCAATCAATGATATTAATCAAACTACACCTGCTACAACAGCT
    AAAGCAGCAGCTCTTGAAGAATTTGACGAAGTTGTTCAAGCACAAATTGATCAAGCACCT
    TTAAATCCTGATACAACAAATGAAGAAGTAGCGGAAGCTATTGAACGTATTAATGCAGCT
    AAAGTTTCTGGTGTTAAAGCAATTGAAGCGACAACGACTGCACAAGATTTAGAAAGAGTT
    AAAAACGAAGAAATCTCAAAAATTGAAAATATTACTGACTCTACGCAAACAAAAATGGAT
    GCCTATAATGAAGTTAAACAAGCTGCAACAGCTAGAAAAGCTCAAAATGCTACAGTTTCA
    AATGCAACAAATGAAGAAGTAGCAGAAGCTGATGCAGCAGTAGATGCAGCTCAAAAGCAA
    GGTTTACATGACATCCAAGTTGTTAAATCAAAACAGGAAGTTGCTGATACAAAATCAAAA
    GTATTAGATAAAATCAATGCAATTCAAACACAAGCAAAAGTTAAACCTGCAGCTGATACG
    GAAGTAGAAAACGCATATAATACACGTAAACAAGAAATTCAAAATAGCAATGCTTCAACT
    ACAGAAGAAAAACAAGCTGCATATACAGAATTAGATACTAAAAAGCAAGAAGCAAGAACA
    AATCTTGATGCTGCAAATACAAACAGTGATGTAACAACAGCTAAAGACAATAGTATTGCT
    GCAATTAATCAAGTTCAAGCTGCCACAACTAAGAAATCGGATGCAAAAGCGGAAATCGCT
    CAAAAAGCAAGTGAACGTAAAACAGCAATTGAAGCAATGAATGATTCGACTACTGAAGAA
    CAACAAGCAGCGAAAGACAAAGTGGATCAAGCAGTAGTTACTGCAAACGCTGATATAGAT
    AATGCTGCAGCAAACAATGATGTGGATAATGCAAAAACTACAAATGAAGCTACAATCGCA
    GCCATTACACCTGATGCAAATGTTAAACCAGCAGCAAAACAAGCAATTGCAGATAAAGTA
    CAAGCTCAAGAAACAGCAATTGATGGAAATAACGGCTCAACAACTGAAGAAAAAGCAGCT
    GCTAAACAACAAGTTCAAACTGAAAAAACAACAGCTGATGCCGCAATAGATGCAGCACAT
    ACAAATGCGGAAGTTGAAGCGGCTAAAAAAGCAGCAATTGCTAAAATTGAAGCGATTCAG
    CCAGCAACAACAACTAAAGATAATGCGAAAGAAGCAATTGCTACGAAAGCGAATGAACGT
    AAAACAGCAATCGCTCAAACGCAAGACATTACTGCTGAAGAAATTGCAGCGGCTAATGCG
    GACGTAGATAATGCTGTGACACAAGCAAATAGCAACATTGAAGCTGCTAATAGTCAAAAT
    GATGTAGACCAAGCGAAAACGACAGGTGAAAATAGTATTGATCAAGTAACACCAACAGTT
    AATAAAAAAGCAACTGCACGTAATGAAATCACAGCAATTTTAAATAACAAATTGCAAGAG
    ATTCAAGCTACGCCAGATGCAACAGATGAAGAAAAACAAGCAGCTGATGCTGAAGCAAAT
    ACTGAAAATGGTAAAGCAAATCAAGCCATTTCAGCAGCAACTACTAACGCACAAGTTGAT
    GAAGCTAAAGCAAATGCAGAAGCAGCGATTAATGCGGTAACACCAAAAGTTGTGAAGAAA
    CAAGCGGCTAAAGATGAAATTGATCAATTACAAGCAACGCAAACAAATGTTATCAATAAT
    GATCAGAACGCTACAACAGAAGAAAAAGAAGCAGCTATTCAACAATTAGCAACAGCAGTT
    ACAGACGCGAAAAATAATATTACAGCTGCAACTGATGATAATGGTGTAGATCAGGCGAAA
    GACGCTGGAAAGAATTCAATTCAAAGCACGCAACCAGCAACAGCGGTTAAATCAAATGCT
    AAAAATGATGTTGATCAAGCTGTGACAACTCAAAATCAAGCAATTGATAATACAACTGGT
    GCTACAACTGAAGAGAAAAATGCAGCAAAAGATTTAGTTTTAAAAGCTAAAGAAAAAGCG
    TATCAAGATATCTTAAATGCACAAACAACTAATGATGTTACGCAAATTAAAGATCAAGCA
    GTTGCTGATATTCAAGGTATTACTGCAGATACAACAATTAAAGATGTTGCGAAAGATGAA
    TTAGCAACAAAAGCAAACGAACAAAAAGCGCTTATTGCACAAACTGCAGATGCGACTACT
    GAAGAAAAAGAACAAGCAAATCAACAAGTAGACGCACAATTAACACAAGGTAATCAAAAT
    ATTGAAAATGCACAGTCAATCGATGATGTAAACACTGCAAAAGATAATGCAATTCAAGCA
    ATTGACCCAATTCAAGCATCAACAGATGTTAAAACGAATGCAAGAGCGGAATTGCTAACT
    GAAATGCAAAATAAAATAACTGAAATACTTAATAATAATGAGACTACTAATGAAGAAAAA
    GGTAACGATATTGGACCAGTTAGAGCAGCATATGAAGAAGGTTTAAATAATATTAATGCA
    GCAACTACTACAGGTGATGTAACTACTGCTAAAGATACAGCAGTACAAAAAGTTCAACAA
    CTTCATGCAAATCCTGTTAAGAAACCAGCAGGTAAAAAAGAATTAGATCAAGCTGCAGCT
    GATAAGAAAACACAAATAGAACAAACACCAAATGCATCACAACAAGAAATTAATGATGCA
    AAACAAGAAGTTGATACTGAATTAAATCAAGCGAAAACAAATGTCGATCAATCATCAACA
    AATGAATATGTTGATAATGCAGTTAAAGAAGGAAAAGCTAAAATTAATGCAGTTAAAACA
    TTTAGTGAGTACAAAAAAGATGCTTTAGCTAAAATTGAAGATGCATATAATGCTAAAGTA
    AACGAAGCGGATAACTCTAACGCATCGACTTCAAGTGAAATTGCTGAAGCGAAACAAAAA
    CTTGCTGAATTAAAACAAACTGCGGATCAAAATGTTAATCAAGCTACTTCTAAAGATGAC
    ATTGAAGTTCAAATTCATAATGACTTAGATAATATTAACGATTACACAATTCCAACAGGT
    AAAAAAGAATCAGCTACAACAGATTTATATGCTTATGCAGATCAGAAGAAAAATAATATT
    TCAGCTGACACTAATGCAACACAAGATGAAAAGCAACAAGCAATTAAGCAAGTTGACCAA
    AATGTTCAAACTGCATTAGAAAGCATTAATAATGGTGTGGATAATGGTGACGTTGATGAT
    GCATTAACACAAGGTAAAGCAGCAATTGATGCTATTCAAGTAGATGCTACTGTTAAACCT
    AAAGCGAACCAAGCTATTGAAGTTAAAGCAGAAGATACGAAAGAATCTATTGATCAAAGT
    GACCAGTTAACTGCTGAAGAAAAAACTGAAGCATTAGCAATGATTAAACAAATTACAGAT
    CAAGCTAAACAAGGTATTACTGATGCAACAACAACTGCTGAAGTTGAAAAAGCGAAAGCT
    CAAGGACTTGAAGCATTTGATAACATTCAAATCGACTCAACAGAAAAACAAAAAGCTATC
    GAAGAATTAGAAACTGCACTAGACCAGATTGAAGCAGGTGTAAATGTCAACGCTGATGCT
    ACAACTGAAGAAAAAGAAGCGTTTACGAATGCTTTAGAAGACATTTTATCAAAAGCAACT
    GAAGATATTTCTGATCAAACTACAAATGCAGAAATCGCTACTGTCAAAAATAGTGCGCTT
    GAACAACTTAAAGCACAACGTATTAATCCTGAAGTTAAGAAAAATGCTTTGGAAGCAATC
    AGAGAAGTGGTTAACAAGCAAATAGAAATAATTAAAAATGCAGATGCAGATGCATCGGCG
    AAAGAAATTGCACGTACGGATTTAGGTAGATATTTTGACAGATTTGCTGATAAATTAGAT
    AAAACACAAACAAATGCAGAAGTTGCTGAATTACAAAATGTAACGATACCTGCAATTGAA
    GCGATTGTGCCTCAGAATGATCCAGATGCTAATGATACTAATAATGGTATAGATAATAAT
    GATGCAACAGCAAATTCAAATGCTAATGCAACACCAGAAAATACTGGACAACCTAACGTA
    TCTGAGACGACAGCTAATGGCAAAGCAGACGCTTCTCCGACAACACCAAATAATAGTGAT
    GCGGCAACAGGTGAAACAACAGCAACATCAGCAACTGATGATGCAAATGATAAACCGCAA
    GCTAATAACAATTCTAGTGTAGATGCATCAACAAACAGTCCGACAATGGATAACGATGTA
    ACTAGTAAACCAGAAGTAGAATCAACTAATAACGGCACAACTGATAAACCTGTAACAGAA
    ACTGATAATGCAACGCCAGCAGAAAGCACAACAAATAACAATAGTACAACTACAGCAACA
    AACGAGAATGCACCAACAGGATCAACAGCAACGGCTCCAACAACTGCGAGCACAGAAGCA
    GCATCATCTGCTGATAGCAAAGATAATGCATCTGTAAATGATTCAAAACAAAATGCTGAA
    GTAAATAATAGTGCTGAATCTCAATCAACTAATGACAAGGTTGCACAACCAAAATCTGAA
    AATAAAGCTAAGGCAGAAAAAGATGGTAGTGATTCAACAAATCAAAGTATGGTTGAATCA
    ACAACTGAAACATTGCCTTCAGCAGACATAACAGAACCAAATGTACCTTCTAATACATCA
    AAAGATAAAGAAGAAAGTACGACAAATCAAACTGATGCAGGACAACTTAAGTCTGAAACT
    AACGTTGCATCTAACGAAGCAGATAAATCGCCAAGCAAAGCTGATACTGAAGTTTCGAAT
    AAACCATCAACATCTGCATCTTCTGAAGCAAAAGAAAAAATGACTTCAACTAATGTTAGC
    CAAAAAGATGATACGGCAACAGCAGATACTAATGATACGCAAAAATCAGTTGGTTCAGCT
    GCAAACAATAAAGCTACGCAAAACGACGGTGCCAATGCATCTCCAGCTACAGTTTCAAAT
    GGAAGCAATAGTGCTAATCAAGATATGCTTAATGTAACTAACACTGACGACCACCAAGCT
    AAGACAAAATCAGCTCAACAAGGAAAAGTTAATAAAGCTAAACAACAAGCTAAAACTTTA
    CCAGATACTGGTATGTCACATAATGACGATTTACCATATGCTGAATTAGCTCTAGGTGCA
    GGTATGGCATTCTTAATTAGAAGATTCACTAAGAAAGACCAACAAACTGAAGAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1620
    1680
    1740
    1800
    1860
    1920
    1980
    2040
    2100
    2160
    2220
    2280
    2340
    2400
    2460
    2520
    2580
    2640
    2700
    2760
    2820
    2880
    2940
    3000
    3060
    3120
    3180
    3240
    3300
    3360
    3420
    3480
    3540
    3600
    3660
    3720
    3780
    3840
    3900
    3960
    4020
    4080
    4140
    4200
    4260
    4320
    4380
    4440
    4500
    4560
    4620
    4680
    4740
    4800
    4860
    4920
    4980
    5040
    5100
    5160
    5220
    5280
    5340
    5400
    5460
    5520
    5580
    5640
    5700
    5760
    5820
    5880
    5940
    6000
    6060
    6120
    6180
    6240
    6300
    6360
    6420
    6480
    6540
    6600
    6660
    6720
    6780
    6840
    6900
    6960
    7020
    7080
    7140
    7200
    7260
    7320
    7380
    7437

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SAOUHSC_02404
  • symbol: SAOUHSC_02404
  • description: hypothetical protein
  • length: 2478
  • theoretical pI: 4.31992
  • theoretical MW: 263016
  • GRAVY: -0.817877

⊟Function[edit | edit source]

  • TIGRFAM:
    SasC/Mrp/FmtB intercellular aggregation domain (TIGR04263; HMM-score: 400.7)
    and 2 more
    gram-positive signal peptide, YSIRK family (TIGR01168; HMM-score: 41.6)
    Cell structure Cell envelope Other LPXTG cell wall anchor domain (TIGR01167; HMM-score: 14.9)
  • TheSEED  :
    • FmtB (Mrp) protein involved in methicillin resistance and cell wall biosynthesis
  • PFAM:
    B_GA (CL0598) DUF1542; Domain of Unknown Function (DUF1542) (PF07564; HMM-score: 804.8)
    and 1 more
    no clan defined YSIRK_signal; YSIRK type signal peptide (PF04650; HMM-score: 33)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cellwall
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 10
    • Extracellular Score: 0
    • Internal Helices: 0
  • LocateP: LPxTG Cell-wall anchored
    • Prediction by SwissProt Classification: Cell Wall
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: -0.17
    • Signal peptide possibility: 1
    • N-terminally Anchored Score: -2
    • Predicted Cleavage Site: found LPxTG motif :LPDTG
  • SignalP: Signal peptide SP(Sec/SPI) length 38 aa
    • SP(Sec/SPI): 0.958021
    • TAT(Tat/SPI): 0.037917
    • LIPO(Sec/SPII): 0.001836
    • Cleavage Site: CS pos: 38-39. ASA-AE. Pr: 0.9061
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MNLFRQQKFSIRKFNVGIFSALIATVTFISTNPTTASAAEQNQPAQNQPAQPADANTQPNANAGAQANPTAQPAAPANQGQPAVQPANQGGQANPAGGAAQPNTQPAGQGDQADPNNAAQAQPGNQATPANQAGQGNNQATPNNNATPANQTQPANAPAAAQPAAPVAANAQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPTVTVTDKVNGYSLINNGKIGFVNSELRRSDMFDKNNPQNYQAKGNVAALGRVNANDSTDHGNFNGISKTVNVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPTDADRLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKATNNKEYTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNNSLTTTFPNGNEDSTVLKNMTVNYDQNANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNVANIDTPKNIDFNEKLTYRTASDVVINNAQPEVTLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAEYNKLKQQADTILNEDANHVKTANRASQADIDGLVTKLQAALIDNQAAIAELDTKAQEKVTAAQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTAQGVTTEKDNGIAVLEQDVITPTVKPQAKQDIIQAVTTRKQQIKKSNASLQDEKDVANDKIGKIETKAIKDIDAATTNAQVEAIKTKAINDINQTTPATTAKAAALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIERINAAKVSGVKAIEATTTAQDLERVKNEEISKIENITDSTQTKMDAYNEVKQAATARKAQNATVSNATNEEVAEADAAVDAAQKQGLHDIQVVKSKQEVADTKSKVLDKINAIQTQAKVKPAADTEVENAYNTRKQEIQNSNASTTEEKQAAYTELDTKKQEARTNLDAANTNSDVTTAKDNSIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTTEEQQAAKDKVDQAVVTANADIDNAAANNDVDNAKTTNEATIAAITPDANVKPAAKQAIADKVQAQETAIDGNNGSTTEEKAAAKQQVQTEKTTADAAIDAAHTNAEVEAAKKAAIAKIEAIQPATTTKDNAKEAIATKANERKTAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQAKTTGENSIDQVTPTVNKKATARNEITAILNNKLQEIQATPDATDEEKQAADAEANTENGKANQAISAATTNAQVDEAKANAEAAINAVTPKVVKKQAAKDEIDQLQATQTNVINNDQNATTEEKEAAIQQLATAVTDAKNNITAATDDNGVDQAKDAGKNSIQSTQPATAVKSNAKNDVDQAVTTQNQAIDNTTGATTEEKNAAKDLVLKAKEKAYQDILNAQTTNDVTQIKDQAVADIQGITADTTIKDVAKDELATKANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDPIQASTDVKTNARAELLTEMQNKITEILNNNETTNEEKGNDIGPVRAAYEEGLNNINAATTTGDVTTAKDTAVQKVQQLHANPVKKPAGKKELDQAAADKKTQIEQTPNASQQEINDAKQEVDTELNQAKTNVDQSSTNEYVDNAVKEGKAKINAVKTFSEYKKDALAKIEDAYNAKVNEADNSNASTSSEIAEAKQKLAELKQTADQNVNQATSKDDIEVQIHNDLDNINDYTIPTGKKESATTDLYAYADQKKNNISADTNATQDEKQQAIKQVDQNVQTALESINNGVDNGDVDDALTQGKAAIDAIQVDATVKPKANQAIEVKAEDTKESIDQSDQLTAEEKTEALAMIKQITDQAKQGITDATTTAEVEKAKAQGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVNADATTEEKEAFTNALEDILSKATEDISDQTTNAEIATVKNSALEQLKAQRINPEVKKNALEAIREVVNKQIEIIKNADADASAKEIARTDLGRYFDRFADKLDKTQTNAEVAELQNVTIPAIEAIVPQNDPDANDTNNGIDNNDATANSNANATPENTGQPNVSETTANGKADASPTTPNNSDAATGETTATSATDDANDKPQANNNSSVDASTNSPTMDNDVTSKPEVESTNNGTTDKPVTETDNATPAESTTNNNSTTTATNENAPTGSTATAPTTASTEAASSADSKDNASVNDSKQNAEVNNSAESQSTNDKVAQPKSENKAKAEKDGSDSTNQSMVESTTETLPSADITEPNVPSNTSKDKEESTTNQTDAGQLKSETNVASNEADKSPSKADTEVSNKPSTSASSEAKEKMTSTNVSQKDDTATADTNDTQKSVGSAANNKATQNDGANASPATVSNGSNSANQDMLNVTNTDDHQAKTKSAQQGKVNKAKQQAKTLPDTGMSHNDDLPYAELALGAGMAFLIRRFTKKDQQTEE

⊟Experimental data[edit | edit source]

  • experimentally validated: PeptideAtlas [1] [2]
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

  1. ↑ Maren Depke, Stephan Michalik, Alexander Rabe, Kristin Surmann, Lars Brinkmann, Nico Jehmlich, Jörg Bernhardt, Michael Hecker, Bernd Wollscheid, Zhi Sun, Robert L Moritz, Uwe Völker, Frank Schmidt
    A peptide resource for the analysis of Staphylococcus aureus in host-pathogen interaction studies.
    Proteomics: 2015, 15(21);3648-61
    [PubMed:26224020] [WorldCat.org] [DOI] (I p)
  2. ↑ Stephan Michalik, Maren Depke, Annette Murr, Manuela Gesell Salazar, Ulrike Kusebauch, Zhi Sun, Tanja C Meyer, Kristin Surmann, Henrike Pförtner, Petra Hildebrandt, Stefan Weiss, Laura Marcela Palma Medina, Melanie Gutjahr, Elke Hammer, Dörte Becher, Thomas Pribyl, Sven Hammerschmidt, Eric W Deutsch, Samuel L Bader, Michael Hecker, Robert L Moritz, Ulrike Mäder, Uwe Völker, Frank Schmidt
    A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactions.
    Sci Rep: 2017, 7(1);9718
    [PubMed:28887440] [WorldCat.org] [DOI] (I e)
  3. ↑ Ulrike Mäder, Pierre Nicolas, Maren Depke, Jan Pané-Farré, Michel Debarbouille, Magdalena M van der Kooi-Pol, Cyprien Guérin, Sandra Dérozier, Aurelia Hiron, Hanne Jarmer, Aurélie Leduc, Stephan Michalik, Ewoud Reilman, Marc Schaffer, Frank Schmidt, Philippe Bessières, Philippe Noirot, Michael Hecker, Tarek Msadek, Uwe Völker, Jan Maarten van Dijl
    Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
    PLoS Genet: 2016, 12(4);e1005962
    [PubMed:27035918] [WorldCat.org] [DOI] (I e)

⊟Relevant publications[edit | edit source]

Retrieved from "http://aureowiki.med.uni-greifswald.de/index.php?title=SAOUHSC_02404&oldid=66772"