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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000009000
- symbol?: —
- synonym:
- description?: RNA-binding protein
- RNA-binding protein
- S4 domain-containing protein YaaA
- S4 domain protein YaaA
- RNA-binding S4 protein
- S4 region, YaaA
- S4 region YaaA family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 9515..9760
- synteny block?: BlockID0000060
- occurrence?: in 97% of 33 strains
yaaA: DNA-binding oxidative stress-response protein YaaA[1]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0003
08BA02176:
C248_0003
11819-97:
MS7_0003 (yaaA)
6850:
RSAU_000003 (yaaA)
71193:
ST398NM01_0003
ECT-R 2:
ECTR2_3
ED133:
SAOV_0003
ED98:
SAAV_0003
HO 5096 0412:
SAEMRSA15_00030
JH1:
SaurJH1_0003
JH9:
SaurJH9_0003
JKD6008:
SAA6008_00003
JKD6159:
SAA6159_00003
LGA251:
SARLGA251_00030
M013:
M013TW_0004
MRSA252:
SAR0003
MSHR1132:
SAMSHR1132_00030
MSSA476:
SAS0003
Mu3:
SAHV_0003
Mu50:
SAV0003
MW2:
MW0003
RF122:
SAB0003
ST398:
SAPIG0003 (yaaA)
T0131:
SAT0131_00003 (birA)
TCH60:
HMPREF0772_10465 (yaaA)
TW20:
SATW20_00030
USA300_TCH1516:
USA300HOU_0003
VC40:
SAVC_00015
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDR
N315 MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDR
NCTC8325 MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDR
USA300_FPR3757 MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDR
************************************************************
COL IDIPELPEDAGSFLIIHQGEQ
N315 IDIPELPEDAGSFLIIHQGEQ
NCTC8325 IDIPELPEDAGSFLIIHQGEQ
USA300_FPR3757 IDIPELPEDAGSFLIIHQGEQ
*********************
- ↑ Janani Prahlad, Yifeng Yuan, Jiusheng Lin, Chou-Wei Chang, Dirk Iwata-Reuyl, Yilun Liu, Valérie de Crécy-Lagard, Mark A Wilson
The DUF328 family member YaaA is a DNA-binding protein with a novel fold.
J Biol Chem: 2020, 295(41);14236-14247
[PubMed:32796037] [WorldCat.org] [DOI] (I p)Yuanyuan Liu, Sarah C Bauer, James A Imlay
The YaaA protein of the Escherichia coli OxyR regulon lessens hydrogen peroxide toxicity by diminishing the amount of intracellular unincorporated iron.
J Bacteriol: 2011, 193(9);2186-96
[PubMed:21378183] [WorldCat.org] [DOI] (I p)