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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000013000
- symbol?: nnrD
- synonym:
- description?: NAD(P)H-hydrate dehydratase
- NAD(P)H-hydrate dehydratase
- YxkO-related protein
- YjeF protein, C-terminal domain protein
- carbohydrate kinase family protein
- putative YjeF homolog, C-terminus
- sugar kinase
- yjeF-related protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 15608..16309
- synteny block?: BlockID0000100
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0007 (yjeF)
08BA02176:
C248_0007
11819-97:
MS7_0007
6850:
RSAU_000007
71193:
ST398NM01_0007
ECT-R 2:
ECTR2_7
ED133:
SAOV_0007
ED98:
SAAV_0007
HO 5096 0412:
SAEMRSA15_00070
JH1:
SaurJH1_0007
JH9:
SaurJH9_0007
JKD6008:
SAA6008_00007
JKD6159:
SAA6159_00007
LGA251:
SARLGA251_00070
M013:
M013TW_0008
MRSA252:
SAR0007
MSHR1132:
SAMSHR1132_00070
MSSA476:
SAS0007
Mu3:
SAHV_0007
Mu50:
SAV0007
MW2:
MW0007
RF122:
SAB0007c
ST398:
SAPIG0007
T0131:
SAT0131_00007 (dnaA)
TCH60:
HMPREF0772_10461
TW20:
SATW20_00070
USA300_TCH1516:
USA300HOU_0007
VC40:
SAVC_00035
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -------------------------------------------MLAARACVFSGSGLITV
N315 MGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARACVFSGSGLITV
NCTC8325 -------------------------------------------MLAARACVFSGSGLITV
Newman MGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARACVFSGSGLITV
USA300_FPR3757 MGGYITMETLNSINIPKRKEDSHKGDYGKILLIGGSANLGGAIMLAARACVFSGSGLITV
*****************
COL ATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDFKGNNAITFLLQN
N315 ATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDFKGNNAITFLLQN
NCTC8325 ATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDFKGNNAITFLLQN
Newman ATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDFKGNNAITFLLQN
USA300_FPR3757 ATHPTNHSALHSRCPEAMVIDINDTKMLTKMIEMTDSILIGPGLGVDFKGNNAITFLLQN
************************************************************
COL IQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEEQTYERNREAVDR
N315 IQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEEQTYERNREAVDR
NCTC8325 IQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEEQTYERNREAVDR
Newman IQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEEQTYERNREAVDR
USA300_FPR3757 IQPHQNLIVDGDAITIFSKLKPQLPTCRVIFTPHLKEWERLSGIPIEEQTYERNREAVDR
************************************************************
COL LGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSA
N315 LGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSA
NCTC8325 LGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSA
Newman LGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSA
USA300_FPR3757 LGATVVLKKHGTEIFFKDEDFKLTIGSPAMATGGMGDTLAGMITSFVGQFDNLKEAVMSA
************************************************************
COL TYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES
N315 TYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES
NCTC8325 TYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES
Newman TYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES
USA300_FPR3757 TYTHSFIGENLAKDMYVVPPSRLINEIPYAMKQLES
************************************