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PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary[edit | edit source]

  • pan ID?: SAUPAN000061000
  • symbol?: tnpC
  • synonym:
  • description?: transposase

      descriptions from strain specific annotations:

    • transposase
    • transposase for Tn554
    • transposase C 1
    • Transposase for transposon Tn554
  • strand?: -
  • coordinates?: 69761..70138
  • synteny block?: BlockID0000540
  • occurrence?: in 26% of 34 strains

⊟Additional information (user-provided)[edit | edit source]

⊟Orthologs[edit | edit source]

    COL:
    —
    N315:
    SA0050 (tnpC)
    NCTC8325:
    —
    Newman:
    —
    USA300_FPR3757:
    —
    JSNZ:
    —
    04-02981:
    SA2981_0054 (tnpC)
    08BA02176:
    —
    11819-97:
    —
    6850:
    —
    71193:
    —
    ECT-R 2:
    —
    ED133:
    —
    ED98:
    —
    HO 5096 0412:
    —
    JH1:
    SaurJH1_0041
    JH9:
    SaurJH9_0041
    JKD6008:
    —
    JKD6159:
    —
    LGA251:
    —
    M013:
    —
    MRSA252:
    SAR0052 (tnpC1)
    MSHR1132:
    —
    MSSA476:
    —
    Mu3:
    SAHV_0053 (tnpC)
    Mu50:
    SAV0054 (tnpC)
    MW2:
    —
    RF122:
    —
    ST398:
    —
    T0131:
    SAT0131_02869 (trpA)
    TCH60:
    —
    TW20:
    SATW20_00410 (tnpC1)
    USA300_TCH1516:
    —
    VC40:
    —

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

  • alignment of orthologues:

⊟Literature[edit | edit source]