PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000099000
• symbol^?: ugpQ
• synonym:
• description^?: glycerophosphoryl diester phosphodiesterase

  descriptions from strain specific annotations:

  • glycerophosphoryl diester phosphodiesterase
  • putative glycerophosphoryl diester phosphodiesterase
  • glycerophosphodiester phosphodiesterase
  • glycerophosphoryl diester phosphodiesterase, UgpQ_1
  • glycerophosphoryl diester phosphodiesterase family protein
  • glycerophosphoryl diester phosphodiesterase-like protein
• strand^?: +
• coordinates^?: 115283..117131
• synteny block^?: BlockID0000770
• occurrence^?: in 67% of 33 strains

⊟Orthologs

COL:
SACOL0031
N315:
SA0036
NCTC8325:
—
Newman:
—
USA300_FPR3757:
SAUSA300_0030
04-02981:
SA2981_0037
08BA02176:
C248_0034 (ugpQ)
11819-97:
MS7_0031
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_00290 (ugpQ)
JH1:
SaurJH1_0027
JH9:
SaurJH9_0027
JKD6008:
SAA6008_00037 (ugpQ_1)
JKD6159:
SAA6159_00029 (ugpQ_1)
LGA251:
—
M013:
M013TW_0043
MRSA252:
SAR0037 (ugpQ)
MSHR1132:
SAMSHR1132_00300
MSSA476:
—
Mu3:
SAHV_0038
Mu50:
SAV0039
MW2:
MW0029
RF122:
—
ST398:
SAPIG0040
T0131:
SAT0131_00032
TCH60:
HMPREF0772_10437 (glpQ2)
TW20:
SATW20_00720 (ugpQ)
USA300_TCH1516:
USA300HOU_0029 (ugpQ1)
VC40:
—

⊟Genome Viewer

COL
N315
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNM
  N315            MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNM
  USA300_FPR3757  MLTVYGHRGLPSKAPENTIASFKAASEVEGINWLELDVAITKDEQLIIIHDDYLERTTNM
                  ************************************************************
  
  COL             SGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGL
  N315            SGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGL
  USA300_FPR3757  SGEITELNYDEIKDASAGSWFGEKFKDEHLPTFDDVVKIANEYNMNLNVELKGITGPNGL
                  ************************************************************
  
  COL             ALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHTTSFREDWRT
  N315            ALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHTTSFREDWRT
  USA300_FPR3757  ALSKSMVKQVEEQLTNLNQNQEVLISSFNVVLVKLAEEIMPQYNRAVIFHTTSFREDWRT
                  ************************************************************
  
  COL             LLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVNKPARANQLANWGVDGIFTDNAD
  N315            LLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVNKPARANQLANWGVDGIFTDNAD
  USA300_FPR3757  LLDYCNAKIVNTEDAKLTKAKVKMVKEAGYELNVWTVNKPARANQLANWGVDGIFTDNAD
                  ************************************************************
  
  COL             KMVHLSQ
  N315            KMVHLSQ
  USA300_FPR3757  KMVHLSQ
                  *******