PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000133000
• symbol^?: —
• synonym:
• description^?: hypothetical protein
• strand^?: -
• coordinates^?: 157284..157622
• synteny block^?: BlockID0001070
• occurrence^?: in 45% of 33 strains

⊟Orthologs

COL:
SACOL0040
N315:
SA0056
NCTC8325:
—
Newman:
—
USA300_FPR3757:
SAUSA300_0059
04-02981:
SA2981_0060
08BA02176:
C248_0047
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
SaurJH1_0048
JH9:
SaurJH9_0047
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
M013TW_0057
MRSA252:
SAR0058
MSHR1132:
—
MSSA476:
SAS0031
Mu3:
SAHV_0059
Mu50:
SAV0060
MW2:
—
RF122:
—
ST398:
SAPIG0051
T0131:
—
TCH60:
—
TW20:
SATW20_00350
USA300_TCH1516:
USA300HOU_0064
VC40:
—

⊟Genome Viewer

COL
N315
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKTTTQELKQYITRLFQLSNNETWECEALEEAAENILPTRFVDHTPLAHLTLDTYTYYND
  N315            MKTTTQELKQYITRLFQLSNNETWECEALEEAAENILPERFINDSPLAHLTLETYTYYNN
  USA300_FPR3757  MKTTTQELKQYMTRLFQLSNNETWECETLEEAAENILPKRFINDSPLAHLILETYTYYNN
                  ***********:***************:********** **::.:***** *:******:
  
  COL             ELHELSIYPFLMYTNNQLISIGYLDHFDMDFLYLTDTKNTIIDERHLLKEGGTRHE
  N315            ELHDLSIYPFLMYANNQLISVGYLNHFDMDFLYLTDTKNTIIDERHLLREGGTHHE
  USA300_FPR3757  ELHELSIYPFLMYSNNQLISIGYLDHFDMDFLYLTDTKNTIIDERHLLKEGGNNHE
                  ***:*********:******:***:***********************:***..**