PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000386000
• symbol^?: —
• synonym:
• description^?: flavodoxin family protein

  descriptions from strain specific annotations:

  • flavodoxin family protein
  • FMN reductase
  • FMN reductase, putative
  • flavodoxin reductase
  • fmn reductase, NADPH-dependent
  • Trp repressor binding protein
• strand^?: -
• coordinates^?: 394741..395298
• synteny block^?: BlockID0001770
• occurrence^?: in 45% of 33 strains

⊟Orthologs

COL:
SACOL0071
N315:
—
NCTC8325:
SAOUHSC_00043
Newman:
NWMN_0034
USA300_FPR3757:
SAUSA300_0092
04-02981:
—
08BA02176:
C248_0082
11819-97:
—
6850:
RSAU_000039
71193:
ST398NM01_0106
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_00570
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
SAA6159_00072
LGA251:
SARLGA251_00720
M013:
M013TW_0079
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS0063
Mu3:
—
Mu50:
—
MW2:
MW0063
RF122:
—
ST398:
SAPIG0106
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
—
VC40:
SAVC_00190

⊟Genome Viewer

COL
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ------------------------------MNLYQSNIEKVTDNRHSKGANFHNDDYEQI
  NCTC8325        MITCLFGSSRKDGNSAIAVENLLKNLKVNFVNLYQSNIEKVTDNRHSKGANFHNDDYEQI
  Newman          ----------------------MKNLKVNFVNLYQSNIEKVTDNRHSKGANFHNDDYEQI
  USA300_FPR3757  ------------------------------MNLYQSNIEKVTDNRHSKGANFHNDDYEQI
                                                :*****************************
  
  COL             LIKVLESDIIIFSTPLYWYSMSASLKLFIDRWTESLRDTQIDNFKEIMSQKKYLILIIGG
  NCTC8325        LIKVLESDIIIFSTPLYWYSMSASLKLFIDRWTESLRDTQIDNFKEIMSQKKYLILIIGG
  Newman          LIKVLESDIIIFSTPLYWYSMSASLKLFIDRWTESLRDTQIDNFKEIMSQKKYLILIIGG
  USA300_FPR3757  LIKVLESDIIIFSTPLYWYSMSASLKLFIDRWTESLRDTQIDNFKEIMSQKKYLILIIGG
                  ************************************************************
  
  COL             DNPHTKAQPLVNQFKLIFEFMNITNYRFLIGEGNKPFDILNDSQFIEELANINLALKKGD
  NCTC8325        DNPHTKAQPLVNQFKLIFEFMNITNYRFLIGEGNKPFDILNDSQFIEELANINLALKKGD
  Newman          DNPHTKAQPLVNQFKLIFEFMNITNYRFLIGEGNKPFDILNDSQFIEELANINLALKKGD
  USA300_FPR3757  DNPHTKAQPLVNQFKLIFEFMNITNYRFLIGEGNKPFDILNDSQFIEELANINLALKKGD
                  ************************************************************
  
  COL             IYD
  NCTC8325        IYD
  Newman          IYD
  USA300_FPR3757  IYD
                  ***