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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000858000
- symbol?: plc
- synonym:
- description?: 1-phosphatidylinositol phosphodiesterase
- 1-phosphatidylinositol phosphodiesterase
- 1-phosphatidylinositol phosphodiesterase precurosr
- phosphatidylinositol-specific phospholipase C
- 1-phosphatidylinositol phosphodiesterase (Phosphatidylinositol diacylglycerol-lyase) (Phosphatidylinositol-specific phospholipase C) (PI-PLC)
- phosphatidylinositol diacylglycerol-lyase
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1126966..1127952
- synteny block?: BlockID0004190
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0095 (plc)
08BA02176:
C248_0089 (plc)
11819-97:
MS7_0088
6850:
RSAU_000049 (plc)
71193:
ST398NM01_0113
ECT-R 2:
ECTR2_52
ED133:
SAOV_0049 (plc)
ED98:
SAAV_0043 (plc)
HO 5096 0412:
SAEMRSA15_00670 (plc)
JH1:
SaurJH1_0086
JH9:
SaurJH9_0083
JKD6008:
SAA6008_00080 (plc)
JKD6159:
SAA6159_00079 (plc)
LGA251:
SARLGA251_00750 (plc)
M013:
M013TW_0088
MRSA252:
SAR0105 (plc)
MSHR1132:
SAMSHR1132_00710
MSSA476:
SAS0070 (plc)
Mu3:
SAHV_0094 (plc)
Mu50:
SAV0095 (plc)
MW2:
MW0070 (plc)
RF122:
SAB0038 (plc)
ST398:
SAPIG0113
T0131:
SAT0131_00082
TCH60:
HMPREF0772_10395 (plc)
TW20:
SATW20_01140 (plc)
USA300_TCH1516:
USA300HOU_0108 (plc)
VC40:
SAVC_00225
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKCIKTLFLSIILVVMSGWYHSAHASDSLSKSPENWMSKLDDGKHLTEINIPGSHDSGS
N315 MKKCIKTLFLSIILVVMGGWYHSAHASDSLSKSPENWMSKLDESKHLTEINMPGSHDSGS
NCTC8325 MKKCIKTLFLSIILVVMSGWYHSAHASDSLSKSPENWMSKLDDGKHLTEINIPGSHDSGS
Newman MKKCIKTLFLSIILVVMSGWYHSAHASDSLSKSPENWMSKLDDGKHLTEINIPGSHDSGS
USA300_FPR3757 MKKCIKTLFLSIILVVMSGWYHSAHASDSLSKSPENWMSKLDDGKHLTEINIPGSHDSGS
*****************.************************:.*******:********
COL FTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLD
N315 FTLTDPVKSVWAKTQGKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLD
NCTC8325 FTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLD
Newman FTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLD
USA300_FPR3757 FTLKDPVKSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGMVYLHHELGKFLD
***.***********.********************************************
COL DAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTL
N315 DAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTL
NCTC8325 DAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTL
Newman DAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTL
USA300_FPR3757 DAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTGSNANPTL
************************************************************
COL KETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDK
N315 KETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDK
NCTC8325 KETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDK
Newman KETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDK
USA300_FPR3757 KETKGKIVLFNRMGGTYIKSGYGADTSGIQWADNATFETKINNGSLNLKVQDEYKDYYDK
************************************************************
COL KVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTYNYASHINPEIAKTIKANGKAR
N315 KVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTYNYASHINPEIAKTIKENGKAR
NCTC8325 KVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTYNYASHINPEIAKTIKANGKAR
Newman KVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTYNYASHINPEIAKTIKANGKAR
USA300_FPR3757 KVEAVKNLLAKAKTDSNKDNVYVNFLSVASGGSAFNSTYNYASHINPEIAKTIKANGKAR
****************************************************** *****
COL TGWLIVDYAGYTWPGYDDIVSEIIDSNK
N315 TGWLIVDYAGYPWPGYDDIVSEIIDSNK
NCTC8325 TGWLIVDYAGYTWPGYDDIVSEIIDSNK
Newman TGWLIVDYAGYTWPGYDDIVSEIIDSNK
USA300_FPR3757 TGWLIVDYAGYTWPGYDDIVSEIIDSNK
***********.****************