PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000904000
• symbol^?: norG
• synonym:
• description^?: PLP-dependent aminotransferase family protein

  descriptions from strain specific annotations:

  • PLP-dependent aminotransferase family protein
  • GntR family transcriptional regulator
  • aspartate aminotransferase
  • transcriptional regulator GntR family protein
  • aminotransferase class I and II family protein
  • class I and II aminotransferase
  • GntR family transcriptional regulator domain /Aspartate aminotransferase
  • HTH-type transcriptional regulator NorG
  • putative transcriptional regulator
  • transcription regulator GntR
  • truncated Transcriptional regulator, GntR family
• strand^?: +
• coordinates^?: 1169617..1170622
• synteny block^?: BlockID0004410
• occurrence^?: in 55% of 33 strains

⊟Orthologs

COL:
SACOL0091
N315:
SA0104
NCTC8325:
SAOUHSC_00064
Newman:
NWMN_0052
USA300_FPR3757:
SAUSA300_0110
04-02981:
SA2981_0108
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
ECTR2_64
ED133:
—
ED98:
SAAV_0075
HO 5096 0412:
—
JH1:
SaurJH1_0099
JH9:
SaurJH9_0095
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_00830 (norG)
M013:
M013TW_0097
MRSA252:
—
MSHR1132:
SAMSHR1132_00840
MSSA476:
—
Mu3:
SAHV_0107
Mu50:
SAV0108
MW2:
—
RF122:
SAB0047
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0119
VC40:
SAVC_00280

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MAKYKDIASDIRDKIITGDWFYGMKIPSHRQLAIQYNVNRVTIIKSIELLEAEGFIYTKV
  N315            -----------------------MKIPPQRQLAIQYNVNRVTIIKSIELLEAEGFIYTKV
  NCTC8325        MAKYKDIASDIRDKIITGDWFYGMKIPSHRQLAIQYNVNRVTIIKSIELLEAEGFIYTKV
  Newman          MAKYKDIASDIRDKIITGDWFYGMKIPSHRQLAIQYNVNRVTIIKSIELLEAEGFIYTKV
  USA300_FPR3757  MAKYKDIASDIRDKIITGDWFYGMKIPSHRQLAIQYNVNRVTIIKSIELLEAEGFIYTKV
                                         ****.:*******************************
  
  COL             GSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIETDDSYIHISKGELGISLM
  N315            GSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIETDDSYIHISKGELGISLM
  NCTC8325        GSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIETDDSYIHISKGELGISLM
  Newman          GSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIETDDSYIHISKGELGISLM
  USA300_FPR3757  GSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIETDDSYIHISKGELGISLM
                  ************************************************************
  
  COL             PHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERMSKQGINVGRENVMITSGALH
  N315            PHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERMSKQGINVGRENVMITSGALH
  NCTC8325        PHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERMSKQGINVGRENVMITSGALH
  Newman          PHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERMSKQGINVGRENVMITSGALH
  USA300_FPR3757  PHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERMSKQGINVGRENVMITSGALH
                  ************************************************************
  
  COL             AIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHIDVPYNQINEIDTIIDRFINFKN
  N315            AIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHIDVPYNQINEINTIIDRFINFKN
  NCTC8325        AIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHIDVPYNQINEIDTIIDRFINFKN
  Newman          AIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHIDVPYNQINEIDTIIDRFINFKN
  USA300_FPR3757  AIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHIDVPYNQINEIDTIIDRFINFKN
                  ************************************************:***********
  
  COL             KAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPIIEDDIFRDIFFSDPTPSIKTYDKL
  N315            KAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPIIEDDIFRDIFFSDPTPAIKTYDKL
  NCTC8325        KAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPIIEDDIFRDIFFSDPTPSIKTYDKL
  Newman          KAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPIIEDDIFRDIFFSDPTPSIKTYDKL
  USA300_FPR3757  KAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPIIEDDIFRDIFFSDPTPSIKTYDKL
                  ****************************************************:*******
  
  COL             GKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSY
  N315            GKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSY
  NCTC8325        GKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSY
  Newman          GKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSY
  USA300_FPR3757  GKVIHISSFSKTIAPAIRIGWIVASEKIIEQLADVRMQIDYGSSILSQMVVYEMLKNKSY
                  ************************************************************
  
  COL             DKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLS
  N315            DKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLS
  NCTC8325        DKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLS
  Newman          DKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLS
  USA300_FPR3757  DKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLS
                  ************************************************************
  
  COL             KEKILINPGYIYGSKEKSIRLSFAFESNENIKHALYKIYTYVKKV
  N315            KEKILINPGYIYGSKEKSIRLSFAFESNENIKHALYKIYTYVKKV
  NCTC8325        KEKILINPGYIYGSKEKSIRLSFAFESNENIKHALYKIYTYVKKV
  Newman          KEKILINPGYIYGSKEKSIRLSFAFESNENIKHALYKIYTYVKKV
  USA300_FPR3757  KEKILINPGYIYGSKEKSIRLSFAFESNENIKHALYKIYTYVKKV
                  *********************************************