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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000943000
- symbol?: sasD
- synonym:
- description?: cell wall surface anchor family protein
- cell wall surface anchor family protein
- cell-wall-anchored protein SasD
- cell wall-anchored protein SasD, putative
- surface anchored protein
- cell wall anchor domain-containing protein
- cell-wall-anchored protein SasD (LPXAG motif)
- cell wall surface anchor protein
- LPXTG-motif cell wall anchor domain-containing protein
- putative LPXAG surface protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1204428..1205036
- synteny block?: BlockID0004790
- occurrence?: in 88% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0135
08BA02176:
C248_0123 (sasD)
11819-97:
MS7_0125
6850:
RSAU_000088 (sasD)
71193:
ST398NM01_0148
ECT-R 2:
ECTR2_90
ED133:
—
ED98:
SAAV_0102
HO 5096 0412:
—
JH1:
SaurJH1_0125
JH9:
SaurJH9_0120
JKD6008:
SAA6008_00112 (sasD)
JKD6159:
SAA6159_00117 (sasD)
LGA251:
—
M013:
—
MRSA252:
SAR0136 (sasD)
MSHR1132:
SAMSHR1132_01100
MSSA476:
SAS0108
Mu3:
SAHV_0133
Mu50:
SAV0134
MW2:
MW0108
RF122:
SAB0073
ST398:
SAPIG0148
T0131:
SAT0131_00122
TCH60:
HMPREF0772_10364 (sasD)
TW20:
SATW20_01450 (sasD)
USA300_TCH1516:
USA300HOU_0146 (sasD)
VC40:
SAVC_00410
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVSNKQSQNVQNHRPYGGVVPQGMTQA
N315 MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQA
NCTC8325 MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVSNKQSQNVQNHRPYGGVVPQGMTQA
Newman MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVSNKQSQNVQNHRPYGGVVPQGMTQA
USA300_FPR3757 MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVSNKQSQNVQNHRPYGGVVPQGMTQA
***********************************.************************
COL QYTELEKALPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHAL
N315 QYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHAL
NCTC8325 QYTELEKALPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHAL
Newman QYTELEKALPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHAL
USA300_FPR3757 QYTELEKALPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHAL
*******:****************************************************
COL PLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQGHMNQNTHMNQQPHMQQGH--MQS
N315 PLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGH--MQS
NCTC8325 PLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQGHMNQNTHEPTATHATRSYAIIKP
Newman PLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQGHMNQNTHMNQQPHMQQGH--MQS
USA300_FPR3757 PLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQGHMNQNTHMNQQPHMQQGH--MQS
************************************.******* .: :.: ::.
COL SNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRS
N315 SNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRS
NCTC8325 SNDESKSKYAFIKSSNEP------------------------------------------
Newman SNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRS
USA300_FPR3757 SNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRS
**.: * * ::***.
COL TNK
N315 TNK
NCTC8325 --K
Newman TNK
USA300_FPR3757 TNK
*