PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000956000
• symbol^?: phnC
• synonym:
• description^?: phosphonates import ATP-binding protein PhnC

  descriptions from strain specific annotations:

  • phosphonates import ATP-binding protein PhnC
  • phosphonate ABC transporter ATP-binding protein
  • ABC transport ATP-binding protein
  • amino acid ABC transporter ATP-binding protein
  • phosphonate ABC transporter, ATP-binding protein
  • ABC transporter ATP binding protein
  • PhnC protein
  • phosphonate ABC superfamily ATP binding cassette transporter, ABC protein
  • phosphonate ABC transporter ATPase
  • putative ABC transport ATP-binding protein
  • transport system protein
• strand^?: -
• coordinates^?: 1215686..1216459
• synteny block^?: BlockID0004910
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0127
N315:
SA0137
NCTC8325:
SAOUHSC_00104
Newman:
NWMN_0086
USA300_FPR3757:
SAUSA300_0144 (phnC)
04-02981:
SA2981_0143
08BA02176:
C248_0131
11819-97:
MS7_0133 (phnC)
6850:
RSAU_000096 (phnC)
71193:
ST398NM01_0156
ECT-R 2:
ECTR2_98 (phnC)
ED133:
SAOV_0089
ED98:
SAAV_0110
HO 5096 0412:
SAEMRSA15_01080
JH1:
SaurJH1_0133
JH9:
SaurJH9_0128
JKD6008:
SAA6008_00120 (phnC)
JKD6159:
SAA6159_00125 (phnC)
LGA251:
SARLGA251_01160
M013:
M013TW_0132
MRSA252:
SAR0144
MSHR1132:
SAMSHR1132_01180
MSSA476:
SAS0116
Mu3:
SAHV_0141
Mu50:
SAV0142
MW2:
MW0116
RF122:
SAB0083c
ST398:
SAPIG0156 (phnC)
T0131:
SAT0131_00131
TCH60:
HMPREF0772_10356 (phnC)
TW20:
SATW20_01530
USA300_TCH1516:
USA300HOU_0154
VC40:
SAVC_00455

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGE
  N315            MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGE
  NCTC8325        MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGE
  Newman          MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGE
  USA300_FPR3757  MSQIEFKNVSKVYPNGHVGLKNINLNIEKGEFAVIVGLSGAGKSTLLRSVNRLHDITSGE
                  ************************************************************
  
  COL             IFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLF
  N315            IFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLF
  NCTC8325        IFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLF
  Newman          IFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLF
  USA300_FPR3757  IFIQGKSITKAHGKALLEMRRNIGMIFQHFNLVKRSSVLRNVLSGRVGYHPTWKMVLGLF
                  ************************************************************
  
  COL             PKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIARALCQESEIILADEPVASLDP
  N315            PKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIARALCQESEIILADEPVASLDP
  NCTC8325        PKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIARALCQESEIILADEPVASLDP
  Newman          PKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIARALCQESEIILADEPVASLDP
  USA300_FPR3757  PKEDKIKAMDALERVNILDKYNQRSDELSGGQQQRISIARALCQESEIILADEPVASLDP
                  ************************************************************
  
  COL             LTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASEATDDVF
  N315            LTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASEATDDVF
  NCTC8325        LTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASEATDDVF
  Newman          LTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASEATDDVF
  USA300_FPR3757  LTTKQVMDDLRKINQELGITILINLHFVDLAKEYGTRIIGLRDGEVVYDGPASEATDDVF
                  ************************************************************
  
  COL             SEIYGRTIKEDEKLGVN
  N315            SEIYGRTIKEDEKLGVN
  NCTC8325        SEIYGRTIKEDEKLGVN
  Newman          SEIYGRTIKEDEKLGVN
  USA300_FPR3757  SEIYGRTIKEDEKLGVN
                  *****************