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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000958000
- symbol?: —
- synonym:
- description?: PPE-repeat protein
- PPE-repeat protein
- putative ABC-type transporter
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1217862..1219406
- synteny block?: BlockID0004930
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0145
08BA02176:
C248_0133
11819-97:
MS7_0135
6850:
RSAU_000098
71193:
ST398NM01_0158
ECT-R 2:
ECTR2_100
ED133:
SAOV_0091
ED98:
SAAV_0112
HO 5096 0412:
SAEMRSA15_01100
JH1:
SaurJH1_0135
JH9:
SaurJH9_0130
JKD6008:
SAA6008_00122
JKD6159:
SAA6159_00127
LGA251:
SARLGA251_01180
M013:
M013TW_0134
MRSA252:
SAR0146
MSHR1132:
SAMSHR1132_01200
MSSA476:
SAS0118
Mu3:
SAHV_0143
Mu50:
SAV0144
MW2:
MW0118
RF122:
SAB0085
ST398:
SAPIG0158
T0131:
SAT0131_00133
TCH60:
HMPREF0772_10354
TW20:
SATW20_01550
USA300_TCH1516:
USA300HOU_0156
VC40:
SAVC_00465
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQRTVLFDRSHGQTAGAADWVSDG
N315 MKKIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQRTVLFDRSHGQTAGAADWVSDG
NCTC8325 MKKIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQRTVLFDRSHGQTAGAADWVSDG
Newman MKKIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQRTVLFDRSHGQTAGAADWVSDG
USA300_FPR3757 MKKIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQRTVLFDRSHGQTAGAADWVSDG
************************************************************
COL AFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKIFVIPEANIPFKESEQAAIVKYVKQG
N315 AFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKIFVIPEANIPFKESEQAAIVNYVKQG
NCTC8325 AFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKIFVIPEANIPFKESEQAAIVKYVKQG
Newman AFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKIFVIPEANIPFKESEQAAIVKYVKQG
USA300_FPR3757 AFSDYADSIQKQGYDVKAIDGHSNITEASLKSSKIFVIPEANIPFKESEQAAIVKYVKQG
******************************************************:*****
COL GNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGMNAEEKSSTAMQGVKSSDWLS
N315 GNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGMNAEEKSSTAMQGVKSSDWLS
NCTC8325 GNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGMNAEEKSSTAMQGVKSSDWLS
Newman GNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGMNAEEKSSTAMQGVKSSDWLS
USA300_FPR3757 GNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGMNAEEKSSTAMQGVKSSDWLS
************************************************************
COL TNFGVRFRYNALGDLNTSNIVSSKESFGITEGVKSVSMHAGSTLAITNPEKAKGIVYTPE
N315 TNFGVRFRYNALGDLNTSNIVSSKESFGITEGVKSVSMHAGSTLAITNPEKAKGIVYTPE
NCTC8325 TNFGVRFRYNALGDLNTSNIVSSKESFGITEGVKSVSMHAGSTLAITNPEKAKGIVYTPE
Newman TNFGVRFRYNALGDLNTSNIVSSKESFGITEGVKSVSMHAGSTLAITNPEKAKGIVYTPE
USA300_FPR3757 TNFGVRFRYNALGDLNTSNIVSSKESFGITEGVKSVSMHAGSTLAITNPEKAKGIVYTPE
************************************************************
COL QLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKGKAAFIGDSSLVEDSSPKYVREDNG
N315 QLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKGKAAFIGDSSLVEDSSPKYVREDNG
NCTC8325 QLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKGKAAFIGDSSLVEDSSPKYVREDNG
Newman QLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKGKAAFIGDSSLVEDSSPKYVREDNG
USA300_FPR3757 QLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKGKAAFIGDSSLVEDSSPKYVREDNG
************************************************************
COL EKKKTYDGFKEQDNGKLLNNITAWMSKDNDGKSLKASSLTLDTKTKLLDFERPERSTEPE
N315 EKKKTYDGFKEQDNGKLLNNITAWMSKDSDGKSLKASGLTLDTKTKLLDFERPERSTEPE
NCTC8325 EKKKTYDGFKEQDNGKLLNNITAWMSKDNDGKSLKASSLTLDTKTKLLDFERPERSTEPE
Newman EKKKTYDGFKEQDNGKLLNNITAWMSKDNDGKSLKASSLTLDTKTKLLDFERPERSTEPE
USA300_FPR3757 EKKKTYDGFKEQDNGKLLNNITAWMSKDNDGKSLKASSLTLDTKTKLLDFERPERSTEPE
****************************.********.**********************
COL KEPWSQPPSGYKWYDPTTFKAGSYGSEKGADPQPNTPDDHTPPNQNEKVTFDIPQNVSVN
N315 KEPWSQPPSGYKWYDPTTFKAGSYGSEKGADPQPNTPDDHTPPNQNVKISFDIPQNVSVN
NCTC8325 KEPWSQPPSGYKWYDPTTFKAGSYGSEKGADPQPNTPDDHTPPNQNEKVTFDIPQNVSVN
Newman KEPWSQPPSGYKWYDPTTFKAGSYGSEKGADPQPNTPDDHTPPNQNEKVTFDIPQNVSVN
USA300_FPR3757 KEPWSQPPSGYKWYDPTTFKAGSYGSEKGADPQPNTPDDHTPPNQNEKVTFDIPQNVSVN
********************************************** *::**********
COL EPFEMTIHLKGFEANQTLENLRVGIYKEGGRQIGQFSSKDNDYNPPGYSTLPTVKADENG
N315 EPFEVTIHLKGFEANQTLENLRVGIYKEGGRQIGQFSSKDNDYNPPGYSTLPTVKADENG
NCTC8325 EPFEMTIHLKGFEANQTLENLRVGIYKEGGRQIGQFSSKDNDYNPPGYSTLPTVKADENG
Newman EPFEMTIHLKGFEANQTLENLRVGIYKEGGRQIGQFSSKDNDYNPPGYSTLPTVKADENG
USA300_FPR3757 EPFEMTIHLKGFEANQTLENLRVGIYKEGGRQIGQFSSKDNDYNPPGYSTLPTVKADENG
****:*******************************************************
COL NVTIKVNAKVLESMEGSKIRLKLGDKTLITTDFK
N315 NATIKINAKVLESMEGSKIRLKLGDKTLITTDFK
NCTC8325 NVTIKVNAKVLESMEGSKIRLKLGDKTLITTDFK
Newman NVTIKVNAKVLESMEGSKIRLKLGDKTLITTDFK
USA300_FPR3757 NVTIKVNAKVLESMEGSKIRLKLGDKTLITTDFK
*.***:****************************