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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN000963000
  • symbol?:
  • synonym:
  • description?: ImmA/IrrE family metallo-endopeptidase

      descriptions from strain specific annotations:

    • ImmA/IrrE family metallo-endopeptidase
    • putative transcriptional regulator
    • zinc peptidase
    • helix-turn-helix family protein
    • putative DNA-binding protein
    • Putative transcription regulator
    • transcriptional regulator
    • Zn peptidase with DNA binding
  • strand?: +
  • coordinates?: 1222703..1223877
  • synteny block?: BlockID0004980
  • occurrence?: in 67% of 33 strains

Suggest a pan gene symbol of "rmrA" and a description of "RosmerTA bacteriophage defense addiction module, antitoxin component" to harmonize with PMID 36302390 with further validation information at DefenseFinder.

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0148
    08BA02176:
    C248_0136
    11819-97:
    6850:
    RSAU_000101
    71193:
    ST398NM01_0161
    ECT-R 2:
    ECTR2_104
    ED133:
    SAOV_0094
    ED98:
    SAAV_0115
    HO 5096 0412:
    JH1:
    SaurJH1_0138
    JH9:
    SaurJH9_0133
    JKD6008:
    SAA6008_00125
    JKD6159:
    SAA6159_00131
    LGA251:
    SARLGA251_01210
    M013:
    M013TW_0137
    MRSA252:
    SAR0149
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_0146
    Mu50:
    SAV0147
    MW2:
    RF122:
    SAB0088
    ST398:
    SAPIG0161
    T0131:
    SAT0131_00137 (gcvT)
    TCH60:
    HMPREF0772_10351
    TW20:
    SATW20_01580
    USA300_TCH1516:
    VC40:

Genome Viewer[edit | edit source]

Alignments[edit | edit source]

  • alignment of orthologues: