Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001005000
- symbol?: —
- synonym:
- description?: cation transporter
- cation transporter
- cation efflux family protein
- putative cation-efflux system membrane protein similar to CzcD
- cation diffusion facilitator family transporter
- cation diffusion facilitator family transporter family protein
- cation diffusion facilitator transporter family protein
- cation-efflux system membrane protein CzcD
- cation efflux system protein
- CDF family cation diffusion facilitator
- Cobalt-zinc-cadmium resistance protein
- putative cation efflux system protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1273536..1274601
- synteny block?: BlockID0005330
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0169
08BA02176:
C248_0158
11819-97:
MS7_0162
6850:
RSAU_000122
71193:
ST398NM01_0183
ECT-R 2:
ECTR2_132
ED133:
SAOV_0115
ED98:
SAAV_0136
HO 5096 0412:
SAEMRSA15_01340
JH1:
SaurJH1_0159
JH9:
SaurJH9_0154
JKD6008:
SAA6008_00146
JKD6159:
SAA6159_00152
LGA251:
SARLGA251_01420
M013:
M013TW_0158
MRSA252:
SAR0170
MSHR1132:
SAMSHR1132_01420
MSSA476:
SAS0143
Mu3:
SAHV_0167
Mu50:
SAV0168
MW2:
MW0143
RF122:
SAB0109
ST398:
SAPIG0183
T0131:
SAT0131_00159
TCH60:
HMPREF0772_10330
TW20:
SATW20_01790
USA300_TCH1516:
USA300HOU_0182
VC40:
SAVC_00610
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -----------------------------------MNGKKANTINRYKYFHHVNHQKIQQ
N315 -----------------------------------MNGKKANTINRYKYFHHVNHQKIQQ
NCTC8325 -----------------------------------MNGKKANTINRYKYFHHVNHQKIQQ
Newman MVNYGSININLRSYKELFLKATILNTTHLFRSGKRMNGKKANTINRYKYFHHVNHQKIQQ
USA300_FPR3757 -----------------------------------MNGKKANTINRYKYFHHVNHQKIQQ
*************************
COL SSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKP
N315 SSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKP
NCTC8325 SSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKP
Newman SSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKP
USA300_FPR3757 SSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKP
************************************************************
COL TARYTFGYLRFEILAAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVN
N315 TARYTFGYLRFEILVAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVN
NCTC8325 TARYTFGYLRFEILAAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVN
Newman TARYTFGYLRFEILAAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVN
USA300_FPR3757 TARYTFGYLRFEILAAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVN
**************.*********************************************
COL IILTVILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVIS
N315 IILTIILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVIS
NCTC8325 IILTVILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVIS
Newman IILTVILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVIS
USA300_FPR3757 IILTVILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVIS
****:*******************************************************
COL LIILRGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLS
N315 LIILRGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLS
NCTC8325 LIILRGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLS
Newman LIILRGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLS
USA300_FPR3757 LIILRGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLS
************************************************************
COL AHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT
N315 AHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT
NCTC8325 AHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT
Newman AHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT
USA300_FPR3757 AHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT
******************************************************