Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001020000
- symbol?: —
- synonym:
- description?: YagU family protein
- YagU family protein
- integral membrane protein
- membrane associated protein
- Membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1292656..1293135
- synteny block?: BlockID0005480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0182
08BA02176:
C248_0170
11819-97:
MS7_0174
6850:
RSAU_000132
71193:
ST398NM01_0195
ECT-R 2:
ECTR2_144
ED133:
SAOV_0125
ED98:
SAAV_0149
HO 5096 0412:
SAEMRSA15_01460
JH1:
SaurJH1_0171
JH9:
SaurJH9_0166
JKD6008:
SAA6008_00159
JKD6159:
SAA6159_00162
LGA251:
SARLGA251_01520
M013:
M013TW_0168
MRSA252:
SAR0182
MSHR1132:
SAMSHR1132_01540
MSSA476:
SAS0156
Mu3:
SAHV_0180
Mu50:
SAV0181
MW2:
MW0155
RF122:
SAB0121c
ST398:
SAPIG0195
T0131:
SAT0131_00172 (cadC)
TCH60:
HMPREF0772_10318
TW20:
SATW20_01910
USA300_TCH1516:
USA300HOU_0194
VC40:
SAVC_00670
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQ
N315 MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQ
NCTC8325 -----MGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQ
Newman MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQ
USA300_FPR3757 MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQ
*******************************************************
COL TYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMP
N315 TYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAIGQGAVFGIAIWVLFHLIIMP
NCTC8325 TYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMP
Newman TYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMP
USA300_FPR3757 TYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAMGQGAVFGIAIWVLFHLIIMP
***************************************:********************
COL IMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN
N315 IMHTVPAVWDQPYQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN
NCTC8325 IMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN
Newman IMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN
USA300_FPR3757 IMHTVPAVWDQPFQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN
************:*******************************