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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001025000
- symbol?: argD
- synonym:
- description?: ornithine aminotransferase
- ornithine aminotransferase
- ornithine aminotransferase 1
- ornithine--oxo-acid transaminase
- ornithine aminotransferase, putative
- Acetylornithine aminotransferase 1
- putative ornithine aminotransferase precursor
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1296540..1297724
- synteny block?: BlockID0005530
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0186
08BA02176:
C248_0174
11819-97:
MS7_0178
6850:
RSAU_000136 (rocD1)
71193:
ST398NM01_0200
ECT-R 2:
ECTR2_148 (rocD)
ED133:
SAOV_0129 (rocD1)
ED98:
SAAV_0153 (rocD1)
HO 5096 0412:
SAEMRSA15_01500
JH1:
SaurJH1_0175
JH9:
SaurJH9_0170
JKD6008:
SAA6008_00163 (rocD1)
JKD6159:
SAA6159_00166 (rocD1)
LGA251:
SARLGA251_01560
M013:
M013TW_0172
MRSA252:
SAR0186
MSHR1132:
SAMSHR1132_01580
MSSA476:
SAS0160
Mu3:
SAHV_0184
Mu50:
SAV0185
MW2:
MW0159
RF122:
SAB0125c
ST398:
SAPIG0200 (rocD)
T0131:
SAT0131_00177
TCH60:
HMPREF0772_10314 (rocD)
TW20:
SATW20_01950
USA300_TCH1516:
USA300HOU_0198 (argD)
VC40:
SAVC_00690
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNSIIELTDYYSSNNYAPLKLVISKGKGVKVWDTDGKQYIDCISGFSVANQGHCHPTIVK
N315 MNSIIELTDYYSSNNYAPLKLVISKGKGVKVWDTDGKQYIDCISGFSVANQGHCHPTIVK
NCTC8325 MNSIIELTDYYSSNNYAPLKLVISKGKGVKVWDTDGKQYIDCISGFSVANQGHCHPTIVK
Newman MNSIIELTDYYSSNNYAPLKLVISKGKGVKVWDTDGKQYIDCISGFSVANQGHCHPTIVK
USA300_FPR3757 MNSIIELTDYYSSNNYAPLKLVISKGKGVKVWDTDGKQYIDCISGFSVANQGHCHPTIVK
************************************************************
COL AMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLPLNSGTEAVEAAIKIARKWGSE
N315 AMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLSLNSGTEAVEAAIKIARKWGSE
NCTC8325 AMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLPLNSGTEAVEAAIKIARKWGSE
Newman AMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLPLNSGTEAVEAAIKIARKWGSE
USA300_FPR3757 AMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLPLNSGTEAVEAAIKIARKWGSE
**************************************.*********************
COL VKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHPLLQGTTTVDFGDIEQLTQAI
N315 VKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHPLLQGTTTVDFGDIEQLTQAI
NCTC8325 VKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHPLLQGTTTVDFGDIEQLTQAI
Newman VKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHPLLQGTTTVDFGDIEQLTQAI
USA300_FPR3757 VKGITDGQVEIIAMNNNFHGRTLGSLSLSNHDAYKAGFHPLLQGTTTVDFGDIEQLTQAI
************************************************************
COL SPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIADEIQVGLGRTGKWFAMEW
N315 SPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILMIADEIQVGLGRTGKWFAMEW
NCTC8325 SPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIADEIQVGLGRTGKWFAMEW
Newman SPNTAAIIWEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIADEIQVGLGRTGKWFAMEW
USA300_FPR3757 SPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIADEIQVGLGRTGKWFAMEW
******** ******************************:********************
COL EQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVL
N315 EQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVL
NCTC8325 EQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVL
Newman EQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVL
USA300_FPR3757 EQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVL
************************************************************
COL KDEQLVERSERLGSFLLKALLQLKHPSIKEIRGRGLFIGIELNTDAAPFVDQLIQRGILC
N315 KDEQLVERSERLGSFLLKALLQLKHPSIKEIRGRGLFIGIELNTDAAPFVDQLIQRGILC
NCTC8325 KDEQLVERSERLGSFLLKALLQLKHPSIKEIRGRGLFIGIELNTDAAPFVDQLIQRGILC
Newman KDEQLVERSERLGSFLLKALLQLKHPSIKEIRGRGLFIGIELNTDAAPFVDQLIQRGILC
USA300_FPR3757 KDEQLVERSERLGSFLLKALLQLKHPSIKEIRGRGLFIGIELNTDAAPFVDQLIQRGILC
************************************************************
COL KDTHRTIIRLSPPLVIDKEEIHQIVAAFQDVFKN
N315 KDTHRTIIRLSPPLVIDKEEIHQIVAAFQDVFKN
NCTC8325 KDTHRTIIRLSPPLVIDKEEIHQIVAAFQDVFKN
Newman KDTHRTIIRLSPPLVIDKEEIHQIVAAFQDVFKN
USA300_FPR3757 KDTHRTIIRLSPPLVIDKEEIHQIVAAFQDVFKN
**********************************