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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001032000
- symbol?: glcA
- synonym:
- description?: PTS glucose EIICBA component
- PTS glucose EIICBA component
- phosphotransferase system enzyme II glucose-specific factor IIA
- glucose-specific PTS transporter protein IIABC component
- PTS system, IIABC components
- PTS system glucose-specific IIBC subunit
- PTS system glucose-specific protein
- glucose-specific PTS transporter protein, IIABC component
- PTS enzyme II
- PTS family glucose/glucoside (glc) porter component IIABC
- PTS family glucose porter, IICBA component
- PTS family porter enzyme II glucose-specific factor IIA
- pts system, glucose-specific iibc component
- PTS system, glucose-specific IICBA component
- PTS system, glucose-specific IIC component / PTS system, glucose-specific IIB component / PTS system, glucose-specific IIA component
- PTS system glucose-like transporter subunit IIB
- PTS system glucose-specific transporter subunit IIABC
- PTS system glucose-specific transporter subunit IIBC
- PTS system glucose-specific transporter subunit IICBA
- PTS system transporter subunit IIABC
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1304299..1306296
- synteny block?: BlockID0005590
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0190 (glcA)
08BA02176:
C248_0181 (glcA)
11819-97:
MS7_0182 (ptsG)
6850:
RSAU_000140 (glcA)
71193:
ST398NM01_0207
ECT-R 2:
ECTR2_152 (ptsG)
ED133:
SAOV_0134
ED98:
SAAV_0158
HO 5096 0412:
SAEMRSA15_01540 (glcA)
JH1:
SaurJH1_0179
JH9:
SaurJH9_0174
JKD6008:
SAA6008_00168
JKD6159:
SAA6159_00171
LGA251:
SARLGA251_01600 (glcA)
M013:
M013TW_0177
MRSA252:
SAR0190 (glcA)
MSHR1132:
SAMSHR1132_01640
MSSA476:
SAS0164
Mu3:
SAHV_0188 (glcA)
Mu50:
SAV0189 (glcA)
MW2:
MW0163 (glcA)
RF122:
SAB0129c (glcA)
ST398:
SAPIG0207 (ptsG)
T0131:
SAT0131_00182
TCH60:
HMPREF0772_10309 (ptsG2)
TW20:
SATW20_01990 (glcA)
USA300_TCH1516:
USA300HOU_0203
VC40:
SAVC_00715
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAMQGESLQHYLPFIQNGGVQTVAKLM
N315 MRKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAIQGEALQHYLPFIQNGGVQNVAKLM
NCTC8325 ----------------MLPVAILPAAGLLLAIGTAMQGESLQHYLPFIQNGGVQTVAKLM
Newman MRKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAMQGESLQHYLPFIQNGGVQTVAKLM
USA300_FPR3757 MRKKLFGQLQRIGKALMLPVAILPAAGLLLAIGTAMQGESLQHYLPFIQNGGVQTVAKLM
*******************:***:**************.*****
COL TGAGGIIFDNLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMNKTMGDFLQVTPKNIGDPA
N315 TAAGSIIFENLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMNKTMGDFLQVTPKNVTDPA
NCTC8325 TGAGGIIFDNLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMNKTMGDFLQVTPKNIGDPA
Newman TGAGGIIFDNLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMNKTMGDFLQVTPKNIGDPA
USA300_FPR3757 TGAGGIIFDNLPMIFALGVAIGLAGGDGVAAIAAFVGYIIMNKTMGDFLQVTPKNIGDPA
*.**.***:**********************************************: ***
COL SGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPSYLGFFAGKRFVPIMMATTSF
N315 SGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPSYLGFFAGKRFVPIMMATTSF
NCTC8325 SGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPSYLGFFAGKRFVPIMMATTSF
Newman SGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPSYLGFFAGKRFVPIMMATTSF
USA300_FPR3757 SGYASILGIPTLQTGVFGGIIIGALAAWCYNKFYNINLPSYLGFFAGKRFVPIMMATTSF
************************************************************
COL ILAFPMALIWPTIQSGLNAFSTGLLDSNTGVAVFLFGFIKRLLIPFGLHHIFHAPFWFEF
N315 ILAFPMALIWPTIQSGLNAFSTGLLDSNTGVAVFLFGFIKRLLIPFGLHHIFHAPFWFEF
NCTC8325 ILAFPMALIWPTIQSGLNAFSTGLLDSNTGVAVFLFGFIKRLLIPFGLHHIFHAPFWFEF
Newman ILAFPMALIWPTIQSGLNAFSTGLLDSNTGVAVFLFGFIKRLLIPFGLHHIFHAPFWFEF
USA300_FPR3757 ILAFPMALIWPTIQSGLNAFSTGLLDSNTGVAVFLFGFIKRLLIPFGLHHIFHAPFWFEF
************************************************************
COL GSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQGEFPVMMFGLPAAALAIYHTAKPEN
N315 GSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQGEFPVMMFGLPAAALAIYHTAKPEN
NCTC8325 GSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQGEFPVMMFGLPAAALAIYHTAKPEN
Newman GSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQGEFPVMMFGLPAAALAIYHTAKPEN
USA300_FPR3757 GSWKNAAGEIIHGDQRIFIEQIREGAHLTAGKFMQGEFPVMMFGLPAAALAIYHTAKPEN
************************************************************
COL KKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPLLFFIHAVLDGLSFLTLYLLDLHLGYT
N315 KKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPLLFFIHAVLDGLSFLTLYLLDVHLGYT
NCTC8325 KKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPLLFFIHAVLDGLSFLTLYLLDLHLGYT
Newman KKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPLLFFIHAVLDGLSFLTLYLLDLHLGYT
USA300_FPR3757 KKVVAGLMGSAALTSFLTGITEPLEFSFLFVAPLLFFIHAVLDGLSFLTLYLLDLHLGYT
******************************************************:*****
COL FSGGFIDYFLLGILPNKTQWWLVIPVGLVYAVIYYFVFRFLIVKLKYKTPGREDKQSQAA
N315 FSGGFIDYVLLGVLPNKTQWWLVIPVGLVYAVIYYFVFRFLIVKLKYKTPGREDKQSQAV
NCTC8325 FSGGFIDYFLLGILPNKTQWWLVIPVGLVYAVIYYFVFRFLIVKLKYKTPGREDKQSQAA
Newman FSGGFIDYFLLGILPNKTQWWLVIPVGLVYAVIYYFVFRFLIVKLKYKTPGREDKQSQAA
USA300_FPR3757 FSGGFIDYFLLGILPNKTQWWLVIPVGLVYAVIYYFVFRFLIVKLKYKTPGREDKQSQAA
********.***:**********************************************.
COL TASATELPYAVLEAMGGKANIKHLDACITRLRVEVNDKSKVDVPGLKDLGASGVLEVGNN
N315 TASATELPYAVLEAMGGKANIKHLDACITRLRVEVNDKSKVDVPGLKDLGASGVLEVGNN
NCTC8325 TASATELPYAVLEAMGGKANIKHLDACITRLRVEVNDKSKVDVPGLKDLGASGVLEVGNN
Newman TASATELPYAVLEAMGGKANIKHLDACITRLRVEVNDKSKVDVPGLKDLGASGVLEVGNN
USA300_FPR3757 TASATELPYAVLEAMGGKANIKHLDACITRLRVEVNDKSKVDVPGLKDLGASGVLEVGNN
************************************************************
COL MQAIFGPKSDQIKHEMQQIMNGQVVENPTTMEDDKDETVVVAEDKSATSELSHIVHAPLT
N315 MQAIFGPKSDQIKHEMQQIMNGQVVENPTTMEDDKDETVVVAEDKSATSELSHIVHAPLT
NCTC8325 MQAIFGPKSDQIKHEMQQIMNGQVVENPTTMEDDKDETVVVAEDKSATSELSHIVHAPLT
Newman MQAIFGPKSDQIKHEMQQIMNGQVVENPTTMEDDKDETVVVAEDKSATSELSHIVHAPLT
USA300_FPR3757 MQAIFGPKSDQIKHEMQQIMNGQVVENPTTMEDDKDETVVVAEDKSATSELSHIVHAPLT
************************************************************
COL GEVTPLSEVPDQVFSEKMMGDGIAIKPSQGEVRAPFNGKVQMIFPTKHAIGLVSDSGLEL
N315 GEVTPLSEVPDQVFSEKMMGDGIAIKPSQGEVRAPFNGKIQMIFPTKHAIGLVSDSGLEL
NCTC8325 GEVTPLSEVPDQVFSEKMMGDGIAIKPSQGEVRAPFNGKVQMIFPTKHAIGLVSDSGLEL
Newman GEVTPLSEVPDQVFSEKMMGDGIAIKPSQGEVRAPFNGKVQMIFPTKHAIGLVSDSGLEL
USA300_FPR3757 GEVTPLSEVPDQVFSEKMMGDGIAIKPSQGEVRAPFNGKVQMIFPTKHAIGLVSDSGLEL
***************************************:********************
COL LIHIGLDTVKLNGEGFTLHVEEGQEVKQGDLLINFDLDYIRNHAKSDITPIIVTQGNITN
N315 LIHIGLDTVKLNGEGFTLHVEEGQEVKQGDLLINFDLDYIRNHAKSDITPIIVTQGNITN
NCTC8325 LIHIGLDTVKLNGEGFTLHVEEGQEVKQGDLLINFDLDYIRNHAKSDITPIIVTQGNITN
Newman LIHIGLDTVKLNGEGFTLHVEEGQEVKQGDLLINFDLDYIRNHAKSDITPIIVTQGNITN
USA300_FPR3757 LIHIGLDTVKLNGEGFTLHVEEGQEVKQGDLLINFDLDYIRNHAKSDITPIIVTQGNITN
************************************************************
COL LDFKQGEHGNISFGDQLFEAK
N315 LDFKQGEHGNISFGDQLFEAK
NCTC8325 LDFKQGEHGNISFGDQLFEAK
Newman LDFKQGEHGNISFGDQLFEAK
USA300_FPR3757 LDFKQGEHGNISFGDQLFEAK
*********************