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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001120000
- symbol?: —
- synonym:
- description?: sorbitol dehydrogenase
- sorbitol dehydrogenase
- alcohol dehydrogenase catalytic domain-containing protein
- zinc-binding sorbitol dehydrogenase, putative
- Galactitol-1-phosphate 5-dehydrogenase
- alcohol dehydrogenase
- arabitol-phosphate dehydrogenase
- L-iditol 2-dehydrogenase
- putative zinc-binding dehydrogenase
- sorbitol dehydrogenase (L-iditol 2-dehydrogenase)(Glucitol dehydrogenase)
- zinc-binding alcohol dehydrogenase
- zinc-binding dehydrogenase family protein
- zinc-binding sorbitol dehydrogenase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1393728..1394780
- synteny block?: BlockID0006400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0248
08BA02176:
C248_0235
11819-97:
MS7_0236
6850:
RSAU_000193 (gutB)
71193:
ST398NM01_0260
ECT-R 2:
ECTR2_209
ED133:
SAOV_0187
ED98:
SAAV_0215
HO 5096 0412:
SAEMRSA15_02070
JH1:
SaurJH1_0239
JH9:
SaurJH9_0233
JKD6008:
SAA6008_00221
JKD6159:
SAA6159_00225
LGA251:
SARLGA251_02120
M013:
M013TW_0229
MRSA252:
SAR0243
MSHR1132:
SAMSHR1132_02160
MSSA476:
SAS0224
Mu3:
SAHV_0247
Mu50:
SAV0248
MW2:
MW0224
RF122:
SAB0187
ST398:
SAPIG0260
T0131:
SAT0131_00239
TCH60:
HMPREF0772_10255 (gutB)
TW20:
SATW20_02500
USA300_TCH1516:
USA300HOU_0259 (gutB)
VC40:
SAVC_00980
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIHTYEGHYKVNFPVTLGH
N315 MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIHTYEGHYKVNFPVTLGH
NCTC8325 MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIHTYEGHYKVNFPVTLGH
Newman MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIHTYEGHYKVNFPVTLGH
USA300_FPR3757 MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIHTYEGHYKVNFPVTLGH
************************************************************
COL EFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCKSKDYNLCNHRKGIGTQVDGAFT
N315 EFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCKSKDYNLCNHRKGIGTQVDGVFT
NCTC8325 EFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCKSKDYNLCNHRKGIGTQVDGAFT
Newman EFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCKSKDYNLCNHRKGIGTQVDGAFT
USA300_FPR3757 EFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCKSKDYNLCNHRKGIGTQVDGAFT
*********************************************************.**
COL NYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQVNSGDVAVVMGPGPIGLLVAQ
N315 NYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQVNSGDVAVVMGPGPIGLLVAQ
NCTC8325 NYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQVNSGDVAVVMGPGPIGLLVAQ
Newman NYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQVNSGDVAVVMGPGPIGLLVAQ
USA300_FPR3757 NYVIAREESLHHIPDEVSYQSAAMTEPLACAYHGVSKIQVNSGDVAVVMGPGPIGLLVAQ
*******************************:****************************
COL VLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQTDLKTYINGITDGYGADVVVECS
N315 VLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQTDLKTYINGITDGYGADVVVECS
NCTC8325 VLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQTDLKTYINGITDGYGADVVVECS
Newman VLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQTDLKTYINGITDGYGADVVVECS
USA300_FPR3757 VLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQTDLKTYINGITDGYGADVVVECS
************************************************************
COL GAVPAARQGLDILRKKGFYSQIGIFKDAEIPFDMEKVIQKEITVVGSRSQKPADWEPSLQ
N315 GAVPAARQGLDIIRKKGFYSQIGIFKDAEIPFDMEKVIQKEITVVGSRSQKPADWEPSLQ
NCTC8325 GAVPAARQGLDILRKKGFYSQIGIFKDAEIPFDMEKVIQKEITVVGSRSQKPADWEPSLQ
Newman GAVPAARQGLDILRKKGFYSQIGIFKDAEIPFDMEKVIQKEITVVGSRSQKPADWEPSLQ
USA300_FPR3757 GAVPAARQGLDILRKKGFYSQIGIFKDAEIPFDMEKVIQKEITVVGSRSQKPADWEPSLQ
************:***********************************************
COL LMADGLVNAEALVTKIYDISKWDEAYQHLKSGEGIKVLLKPLDLDENEGEN
N315 LMADGLVNAEALVTKIYDISKWDEAYQHLKSGEGIKALLKPLDLDENEGEN
NCTC8325 LMADGLVNAEALVTKIYDISKWDEAYQHLKSGEGIKALLKPLDLDENEGEN
Newman LMADGLVNAEALVTKIYDISKWDEAYQHLKSGEGIKVLLKPLDLDENEGEN
USA300_FPR3757 LMADGLVNAEALVTKIYDISKWDEAYQHLKSGEGIKVLLKTLDLDENEGEN
************************************.***.**********