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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001122000
- symbol?: —
- synonym:
- description?: galactitol-1-phosphate 5-dehydrogenase
- galactitol-1-phosphate 5-dehydrogenase
- hexitol dehydrogenase
- putative zinc-binding sorbitol dehydrogenase
- zinc-binding dehydrogenase family oxidoreductase
- sorbitol dehydrogenase
- alcohol dehydrogenase
- oxidoreductase, zinc-binding dehydrogenase family
- pseudogene
- putative sorbitol dehydrogenase
- putative zinc-binding dehydrogenase
- sorbitol dehydrogenase homologue
- Sorbitol dehydrogenase -like protein
- zinc (Zn2+)-binding dehydrogenase
- zinc-binding dehydrogenase family protein
- zinc-binding sorbitol dehydrogenase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1394964..1396008
- synteny block?: BlockID0006420
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0250
08BA02176:
C248_0237
11819-97:
MS7_0238
6850:
RSAU_000194
71193:
ST398NM01_0262
ECT-R 2:
ECTR2_211
ED133:
SAOV_0189
ED98:
SAAV_0217
HO 5096 0412:
SAEMRSA15_02090
JH1:
SaurJH1_0241
JH9:
SaurJH9_0235
JKD6008:
SAA6008_00223
JKD6159:
SAA6159_00227
LGA251:
SARLGA251_02140
M013:
M013TW_0231
MRSA252:
SAR0245
MSHR1132:
SAMSHR1132_02180
MSSA476:
SAS0226
Mu3:
SAHV_0249
Mu50:
SAV0250
MW2:
MW0226
RF122:
SAB0189
ST398:
SAPIG0262
T0131:
SAT0131_00242
TCH60:
HMPREF0772_10253 (gatD)
TW20:
SATW20_02520
USA300_TCH1516:
USA300HOU_0261
VC40:
SAVC_00990
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKALKLYGVEDLRYEDNEKPVIESANDVIIKVRATGICGSDTSRYKKMGPYIKGMPFGHE
N315 MKALKLYGVEDLRYEDNEKPVIESANDVIVKVRATGICGSDTSRYKKMGPYIKGMPFGHE
NCTC8325 MKALKLYGVEDLRYEDNEKPVIESANDVIIKVRATGICGSDTSRYKKMGPYIKGMPFGHE
Newman MKALKLYGVEDLRYEDNEKPVIESANDVIIKVRATGICGSDTSRYKKMGPYIKGMPFGHE
USA300_FPR3757 MKALKLYGVEDLRYEDNEKPVIESANDVIIKVRATGICGSDTSRYKKMGPYIKGMPFGHE
*****************************:******************************
COL FSGVVDAIGSDVTHVNVGDKVTGCPAIPCYQCEYCLKGEYARCEKLFVIGSYEPGSFAEY
N315 FSGVVDAIGSDVTHVNVGDKVTGCPAIPCYQCEYCLKGEYARCEKLFVIGSYEPGSFAEY
NCTC8325 FSGVVDAIGSDVTHVNVGDKVTGCPAIPCYQCEYCLKGEYARCEKLFVIGSYEPGSFAEY
Newman FSGVVDAIGSDVTHVNVGDKVTGCPAIPCYQCEYCLKGEYARCEKLFVIGSYEPGSFAEY
USA300_FPR3757 FSGVVDAIGSDVTHVNVGDKVTGCPAIPCYQCEYCLKGEYARCEKLFVIGSYEPGSFAEY
************************************************************
COL VKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQPGMTVAVMGCGSIGLLAIQWA
N315 VKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQPGMTVAVMGCGSIGLLAIQWA
NCTC8325 VKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQPGMTVAVMGCGSIGLLAIQWA
Newman VKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQPGMTVAVMGCGSIGLLAIQWA
USA300_FPR3757 VKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQPGMTVAVMGCGSIGLLAIQWA
************************************************************
COL RIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEENLEKFIENHYANQIDLAIESSGAKV
N315 RIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEENLEKFIENHYANQIDLAIESSGAKV
NCTC8325 RIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEENLEKFIENHYANQIDLAIESSGAKV
Newman RIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEENLEKFIENHYANQIDLAIESSGAKV
USA300_FPR3757 RIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEENLEKFIENHYANQIDLAIESSGAKV
************************************************************
COL TIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKILRNELTVCGSWNCLSSNFPGKEWTA
N315 TIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKILRNELTVCGSWNCLSSNFPGKEWTA
NCTC8325 TIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKILRNELTVCGSWNCLSSNFPGKEWTA
Newman TIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKILRNELTVCGSWNCLSSNFPGKEWTA
USA300_FPR3757 TIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKILRNELTVCGSWNCLSSNFPGKEWTA
************************************************************
COL TLHYMKTKDINVKPIISHFLPLEKGPETFDKLVNKKERFDKVMFTIY
N315 TLHYMKTKDINVKPIISHFLPLEKGPETFDKLVNKKERFDKVMFTIY
NCTC8325 TLHYMKTKDINVKPIISHFLPLEKGPETFDKLVNKKERFDKVMFTIY
Newman TLHYMKTKDINVKPIISHFLPLEKGPETFDKLVNKKERFDKVMFTIY
USA300_FPR3757 TLHYMKTKDINVKPIISHFLPLEKGPETFDKLVNKKERFDKVMFTIY
***********************************************