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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001161000
- symbol?: —
- synonym:
- description?: MFS transporter
- MFS transporter
- drug transporter
- putative drug transporter
- transmembrane efflux pump protein, putative
- transmembrane efflux pump protein
- drug transporter, putative
- major facilitator superfamily protein
- major facilitator superfamily transporter
- major facilitator transporter
- membrane transporter
- MFS family major facilitator transporter
- multidrug resistance protein B
- putative transport protein
- transport protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1431125..1432709
- synteny block?: BlockID0006810
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0274
08BA02176:
C248_0264
11819-97:
MS7_0265
6850:
RSAU_000220
71193:
ST398NM01_0289
ECT-R 2:
ECTR2_235
ED133:
SAOV_0215
ED98:
SAAV_0242
HO 5096 0412:
SAEMRSA15_02330
JH1:
SaurJH1_0265
JH9:
SaurJH9_0258
JKD6008:
SAA6008_00248
JKD6159:
SAA6159_00252
LGA251:
SARLGA251_02380
M013:
M013TW_0255
MRSA252:
SAR0271
MSHR1132:
SAMSHR1132_02400
MSSA476:
SAS0250
Mu3:
SAHV_0272
Mu50:
SAV0274
MW2:
MW0250
RF122:
SAB0213c
ST398:
SAPIG0289
T0131:
SAT0131_00269
TCH60:
HMPREF0772_10226
TW20:
SATW20_02760
USA300_TCH1516:
USA300HOU_0287
VC40:
SAVC_01115
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTSPAVLNLSISLTSFATG
N315 MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTSPAVLNLSISLTSFATG
NCTC8325 MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTSPAVLNLSISLTSFATG
Newman MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTSPAVLNLSISLTSFATG
USA300_FPR3757 MNNTQSSPRSNIIIAIMLSALTYWLFAQSFINIGPLVGQTYQTSPAVLNLSISLTSFATG
************************************************************
COL IFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALLIIGRILQGLSAAILLPST
N315 IFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALLIIGRILQGLSAAILLPST
NCTC8325 IFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALLIIGRILQGLSAAILLPST
Newman IFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALLIIGRILQGLSAAILLPST
USA300_FPR3757 IFMVAAGDIADKIGQLRMTYMGLIISMFASLLLIISDITALLIIGRILQGLSAAILLPST
************************************************************
COL VGVLNNQFKGEHLRRAISYLMISTVGGIGLAGVIGGLIASNFGWQTNFIISIVIAFIAIL
N315 VGVLNNQFKGEHLRRAISYLMISTVGGIGLAGVIGGLIATNFGWQMNFIISIVIAFIAIL
NCTC8325 VGVLNNQFKGEHLRRAISYLMISTVGGIGLAGVIGGLIASNFGWQTNFIISIVIAFIAIL
Newman VGVLNNQFKGEHLRRAISYLMISTVGGIGLAGVIGGLIASNFGWQTNFIISIVIAFIAIL
USA300_FPR3757 VGVLNNQFKGEHLRRAISYLMISTVGGIGLAGVIGGLIASNFGWQTNFIISIVIAFIAIL
***************************************:***** **************
COL LLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLTQGFEQGWFSTFSIICLSIFIIT
N315 LLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLTQGFEQGWFSTFSFICLSIFIIT
NCTC8325 LLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLTQGFEQGWFSTFSIICLSIFIIT
Newman LLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLTQGFEQGWFSTFSIICLSIFIIT
USA300_FPR3757 LLKGTPEKVSQHSHRHPFDYKGMSIFAVMIGSFTLLLTQGFEQGWFSTFSIICLSIFIIT
**************************************************:*********
COL TLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVLNSGLGVTVVFFIYAQTHLGLSAAQ
N315 TLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVLNSGLGVTVVFFIYAQTHLGLSAAQ
NCTC8325 TLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVLNSGLGVTVVFFIYAQTHLGLSAAQ
Newman TLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVLNSGLGVTVVFFIYAQTHLGLSAAQ
USA300_FPR3757 TLIFIIIERRHEVPFIDFSVLRNRPFIGAFLNNFVLNSGLGVTVVFFIYAQTHLGLSAAQ
************************************************************
COL SGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLIIGPLFPVIGITIISMTQLLASQYVIAV
N315 SGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLIIGPLFPVIGITIISMTQLSASQYVIAV
NCTC8325 SGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLIIGPLFPVIGITIISMTQLLASQYVIAV
Newman SGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLIIGPLFPVIGITIISMTQLLASQYVIAV
USA300_FPR3757 SGLVTLPYAIVAVAMIRLGEKATLRFGGKLMLIIGPLFPVIGITIISMTQLLASQYVIAV
*************************************************** ********
COL IIGFVICAIGNGLVATPGLTIAIFSMPNEKVGLATGLYKMSGTLGGAFGIALSTTVFSML
N315 IIGFVICAIGNGLVATPGLTIAIFSMPNEKVGLATGLYKMSGTLGGAFGIALSTTVFSML
NCTC8325 IIGFVICAIGNGLVATPGLTIAIFSMPNEKVGLATGLYKMSGTLGGSFGIALSTTVFSML
Newman IIGFVICAIGNGLVATPGLTIAIFSMPNEKVGLATGLYKMSGTLGGAFGIALSTTVFSML
USA300_FPR3757 IIGFVICAIGNGLVATPGLTIAIFSMPNEKVGLATGLYKMSGTLGGAFGIALSTTVFSML
**********************************************:*************
COL QLNYAPSVAATVTFIVSIVLMILGSLSAYMIIPKTVKS
N315 QLNYAPSVAATVTFIVSIVLMILGSLSAYMIIPKTVKS
NCTC8325 QLNYAPSVAATVTFIVSIVLMILGSLSAYMIIPKTVKS
Newman QLNYAPSVAATVTFIVSIVLMILGSLSAYMIIPKTVKS
USA300_FPR3757 QLNYAPSVAATVTFIVSIVLMILGSLSAYMIIPKTVKS
**************************************