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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001165000
- symbol?: —
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- ABC-2 transporter family protein
- ABC-2 type transport system permease
- probable membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1435965..1436885
- synteny block?: BlockID0006850
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0278
08BA02176:
C248_0268
11819-97:
MS7_0269
6850:
RSAU_000224
71193:
ST398NM01_0293
ECT-R 2:
ECTR2_239
ED133:
SAOV_0219
ED98:
SAAV_0246
HO 5096 0412:
SAEMRSA15_02370
JH1:
SaurJH1_0269
JH9:
SaurJH9_0262
JKD6008:
SAA6008_00252
JKD6159:
SAA6159_00256
LGA251:
SARLGA251_02420
M013:
M013TW_0259
MRSA252:
SAR0275
MSHR1132:
SAMSHR1132_02440
MSSA476:
SAS0254
Mu3:
SAHV_0276
Mu50:
SAV0278
MW2:
MW0254
RF122:
SAB0217c
ST398:
SAPIG0293
T0131:
SAT0131_00273
TCH60:
HMPREF0772_10222
TW20:
SATW20_02800
USA300_TCH1516:
USA300HOU_0291
VC40:
SAVC_01135
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKPYIQLVVFKQWLQYILLVTTIVIALVLIGIGYRVAHDNFKIPITIQDLDQTTASKSFV
N315 MKPYIQLVLFKQWLQYILLVTTIVIALVLIGIGYRVAHDNFKIPITIQDLDQTTASKSFV
NCTC8325 MKPYIQLVVFKQWLQYILLVTTIVIALVLIGIGYRVAHDNFKIPITIQDLDQTTASKSFV
Newman MKPYIQLVVFKQWLQYILLVTTIVIALVLIGIGYRVAHDNFKIPITIQDLDQTTASKSFV
USA300_FPR3757 MKPYIQLVVFKQWLQYILLVTTIVIALVLIGIGYRVAHDNFKIPITIQDLDQTTASKSFV
********:***************************************************
COL NKIKQSDYVTIKKVDEDESYIEDDVTKKEAILSMQIPKGFSQKLKENRLKETIQLYGRDD
N315 NKIKQSDYVTIKKVDEDESYIEDDVTKKEAILSMQIPKGFSQKLKENRLKETIQLYGRDD
NCTC8325 NKIKQSDYVTIKKVDEDESYIEDDVTKKEAILSMQIPKGFSQKLKENRLKETIQLYGRDD
Newman NKIKQSDYVTIKKVDEDESYIEDDVTKKEAILSMQIPKGFSQKLKENRLKETIQLYGRDD
USA300_FPR3757 NKIKQSDYVTIKKVDEDESYIEDDVTKKEAILSMQIPKGFSQKLKENRLKETIQLYGRDD
************************************************************
COL FIGGIAVEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAINKSYHKHTPESKIKFVSLTKQ
N315 FIGGIAIEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAINKSYHKHTPESKIKFVSLTKQ
NCTC8325 FIGGIAVEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAINKSYHKHTPESKIKFVSLTKQ
Newman FIGGIAVEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAINKSYHKHTPESKIKFVSLTKQ
USA300_FPR3757 FIGGIAVEIVSSSLYEQQIPNIIYEHLEDMKQHQSIDAINKSYHKHTPESKIKFVSLTKQ
******:*****************************************************
COL AQHSISISLIFAVILFVSAVQVVLHYRLNQQAALQRLSQYHLSRFKLYSTYVMTHTILLL
N315 AQHSISISLIFAVILFVSAVQVVLHYRLNQQAALQRLSQYHLSRFKLYSTYVMTHTILLL
NCTC8325 AQHSISISLIFAVILFVSAVQVVLHYRLNQQAALQRLSQYHLSRFKLYSTYVMTHTILLL
Newman AQHSISISLIFAVILFVSAVQVVLHYRLNQQAALQRLSQYHLSRFKLYSTYVMTHTILLL
USA300_FPR3757 AQHSISISLIFAVILFVSAVQVVLHYRLNQQAALQRLSQYHLSRFKLYSTYVMTHTILLL
************************************************************
COL LVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFILFHIQTISHRLFMTFIYALAMGIV
N315 LVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFILFHIQTISHRLFMTFIYALAMGIV
NCTC8325 LVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFILFHIQTISHRLFMTFIYALAMGIV
Newman LVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFILFHIQTISHRLFMTFIYALAMGIV
USA300_FPR3757 LVLLAVSLYLSQPLSLIFYLKSLLLILIYEIGIVFILFHIQTISHRLFMTFIYALAMGIV
************************************************************
COL YLIIFM
N315 YLIIFM
NCTC8325 YLIIFM
Newman YLIIFM
USA300_FPR3757 YLIIFM
******