PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001177000
• symbol^?: essA
• synonym:
• description^?: protein EssA

  descriptions from strain specific annotations:

  • protein EssA
  • type VII secretion protein EssA
  • Putative secretion system component EssA
  • Virulence Protein essA
  • protein EssA (Precursor)
  • protein secretion system EssA
  • pseudogene
• strand^?: +
• coordinates^?: 1446675..1447133
• synteny block^?: BlockID0006960
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0273
N315:
SA0273
NCTC8325:
SAOUHSC_00259
Newman:
NWMN_0221
USA300_FPR3757:
SAUSA300_0280
04-02981:
SA2981_0284 (essA)
08BA02176:
C248_0274 (essA)
11819-97:
MS7_0275 (essA)
6850:
RSAU_000230 (essA)
71193:
ST398NM01_0299
ECT-R 2:
ECTR2_245
ED133:
SAOV_0227
ED98:
SAAV_0252
HO 5096 0412:
SAEMRSA15_02430
JH1:
SaurJH1_0275
JH9:
SaurJH9_0268
JKD6008:
SAA6008_00258 (essA)
JKD6159:
SAA6159_00265 (essA)
LGA251:
SARLGA251_02480 (essA)
M013:
M013TW_0265
MRSA252:
SAR0281
MSHR1132:
SAMSHR1132_02520
MSSA476:
SAS0260
Mu3:
SAHV_0282
Mu50:
SAV0284
MW2:
MW0260
RF122:
SAB0225
ST398:
SAPIG0299
T0131:
SAT0131_00280
TCH60:
HMPREF0772_10216 (essA)
TW20:
SATW20_02860 (essA)
USA300_TCH1516:
USA300HOU_0299 (essA)
VC40:
SAVC_01170

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTLFNKDSKAVNDAIAKQK
  N315            MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTLFNKDSKEVNDAIAKQK
  NCTC8325        MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTLFNKDSKAVNDAIAKQK
  Newman          MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTLFNKDSKAVNDAIAKQK
  USA300_FPR3757  MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTLFNKDSKAVNDAIAKQK
                  ************************************************** *********
  
  COL             KERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESDKSPYIQNKQEKKIFPYIL
  N315            KERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESDKSPYIQNKQEKKIFPYIL
  NCTC8325        KERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESDKSPYIQNKQEKKIFPYIL
  Newman          KERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESDKSPYIQNKQEKKIFPYIL
  USA300_FPR3757  KERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSESDKSPYIQNKQEKKIFPYIL
                  ************************************************************
  
  COL             MSVGAFLTLGFVIFSIHKGRRTKNESARKSNI
  N315            MSVGAFLTLGFVIFSIHKGRRTKNESARKSNI
  NCTC8325        MSVGAFLTLGFVIFSIHKGRRTKNESARKSNI
  Newman          MSVGAFLTLGFVIFSIHKGRRTKNESARKSNI
  USA300_FPR3757  MSVGAFLTLGFVIFSIHKGRRTKNESARKSNI
                  ********************************