Pangenome04-0298108BA0217611819-97685071193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001185000
• symbol^?: esxC
• description^?: protein EsaC

  descriptions from strain specific annotations:

  • protein EsaC
  • virulence protein EsaC
  • type VII secretion substrate EsaC
  • EsaC protein within ESAT-6 gene cluster
• strand^?: +
• coordinates^?: 1456464..1456856
• synteny block^?: BlockID0007040
• occurrence^?: in 67% of 33 strains

⊟Orthologs

COL:
SACOL0277
N315:
SA0277
NCTC8325:
SAOUHSC_00264
Newman:
NWMN_0224
USA300_FPR3757:
SAUSA300_0284
04-02981:
SA2981_0288 (esaC)
08BA02176:
—
11819-97:
MS7_0279 (esaC)
6850:
RSAU_000234 (esaC)
71193:
—
ECT-R 2:
ECTR2_249
ED133:
SAOV_0231
ED98:
SAAV_0256
HO 5096 0412:
—
JH1:
SaurJH1_0279
JH9:
SaurJH9_0272
JKD6008:
—
JKD6159:
SAA6159_00269 (esaC)
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_02560
MSSA476:
SAS0264
Mu3:
SAHV_0286
Mu50:
SAV0289
MW2:
MW0264
RF122:
SAB0229
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0303 (esaC)
VC40:
SAVC_01195

⊟Genome Viewer

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNFNDIETMVKSKFKDIKKHAEEIAHEIEVRSGYLRKAEQYKRLEFNLSFALDDIESTAK
  N315            MNFNDIETMVKSKFKDIKKHAEEIAHEIEVRSGYLRKAEQYKRLEFNLSIALDDVESTAK
  NCTC8325        MNFNDIETMVKSKFKDIKKHAEEIAHEIEVRSGYLRKAEQYKRLEFNLSFALDDIESTAK
  Newman          MNFNDIETMVKSKFKDIKKHAEEIAHEIEVRSGYLRKAEQYKRLEFNLSFALDDIESTAK
  USA300_FPR3757  MNFNDIETMVKSKFKDIKKHAEEIAHEIEVRSGYLRKAEQYKRLEFNLSFALDDIESTAK
                  *************************************************:****:*****
  
  COL             DVQTAKSSANKDSVTVKGKAPNTLYIEKRNLMKQKLEMLGEDIDKNKESLQKAKEIAGEK
  N315            DVQTAKSSANKDSVSVKGKAPNTLYIEKRNLMKQKLEMLGEDIDKNKESLQKAKGIAGEK
  NCTC8325        DVQTAKSSANKDSVTVKGKAPNTLYIEKRNLMKQKLEMLGEDIDKNKESLQKAKEIAGEK
  Newman          DVQTAKSSANKDSVTVKGKAPNTLYIEKRNLMKQKLEMLGEDIDKNKESLQKAKEIAGEK
  USA300_FPR3757  DVQTAKSSANKDSVTVKGKAPNTLYIEKRNLMKQKLEMLGEDIDKNKESLQKAKEIAGEK
                  **************:*************************************** *****
  
  COL             ASEYFNKAMN
  N315            ASEYFNKAMN
  NCTC8325        ASEYFNKAMN
  Newman          ASEYFNKAMN
  USA300_FPR3757  ASEYFNKAMN
                  **********