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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001186000
- symbol?: esxB
- description?: virulence factor EsxB
- virulence factor EsxB
- virulence protein EsxB
- WXG100 family type VII secretion effector EsxB
- ESAT-6/Esx family secreted protein EsxB
- virulence factor EsxB family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1456872..1457251
- synteny block?: BlockID0007040
- occurrence?: in 67% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0289 (esxB)
08BA02176:
—
11819-97:
MS7_0280
6850:
RSAU_000235 (esxB)
71193:
—
ECT-R 2:
ECTR2_250
ED133:
SAOV_0232
ED98:
SAAV_0257
HO 5096 0412:
—
JH1:
SaurJH1_0280
JH9:
SaurJH9_0273
JKD6008:
—
JKD6159:
SAA6159_00270 (esxB)
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_02570
MSSA476:
SAS0265
Mu3:
SAHV_0287
Mu50:
SAV0290
MW2:
MW0265
RF122:
SAB0230
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0304 (esxB)
VC40:
SAVC_01200
⊟Genome Viewer[edit | edit source]
| COL chromosome | |
| N315 chromosome | |
| NCTC8325 chromosome | |
| Newman chromosome | |
| USA300_FPR3757 chromosome |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
N315 MGGYKGIKADGGKVNQAKQLAAKIAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
NCTC8325 MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
Newman MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
USA300_FPR3757 MGGYKGIKADGGKVDQAKQLAAKTAKDIEACQKQTQQLAEYIEGSDWEGQFANKVKDVLL
**************:******** ************************************
COL IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
N315 IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
NCTC8325 IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
Newman IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
USA300_FPR3757 IMAKFQEELVQPMADHQKAIDNLSQNLAKYDTLSIKQGLDRVNP
********************************************