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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001578000
- symbol?: rinB
- synonym:
- description?: transcriptional activator RinB
- transcriptional activator RinB
- phiSLT ORF 50-like protein
- bacteriophage transcriptional regulator
- regulator RinB
- transcriptional activator
- transcriptional activator RinB family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1871736..1871909
- synteny block?: BlockID0010370
- occurrence?: in 44% of 34 strains
rinB : prophage transcriptional activator RinB [1]
All staphylococcal prophages to date encode a RinB paralogue. It may activate expression of the excisionase activity of prophage integrases, potentially via stabilization of late-gene transcriptional activators.
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0341 (rinB)
11819-97:
MS7_1476
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_1937c
ED98:
—
HO 5096 0412:
—
JH1:
SaurJH1_1070
JH9:
SaurJH9_1051
JKD6008:
—
JKD6159:
SAA6159_01386
JSNZ:
JSNZ_000843
LGA251:
—
M013:
—
MRSA252:
SAR1527
MSHR1132:
—
MSSA476:
SAS0923
Mu3:
—
Mu50:
—
MW2:
MW1411
RF122:
—
ST398:
SAPIG0364
T0131:
—
TCH60:
HMPREF0772_11682 (rinB)
TW20:
—
USA300_TCH1516:
USA300HOU_1461
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDYEKIRAEVSW
USA300_FPR3757 MIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDYEKIRAEVSW
* ************************************************
- ↑ Z H Ye, C Y Lee
Cloning, sequencing, and genetic characterization of regulatory genes, rinA and rinB, required for the activation of staphylococcal phage phi 11 int expression.
J Bacteriol: 1993, 175(4);1095-102
[PubMed:8432703] [WorldCat.org] [DOI] (P p)