Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001830000
- symbol?: —
- synonym:
- description?: phage gp6-like head-tail connector protein
- phage gp6-like head-tail connector protein
- phiSLT ORF92-like protein
- prophage L54a, DNA packaging protein
- phage gp6-like head-tail connector family protein
- phage protein
- phage protein DNA packaging protein
- putative phage DNA packaging protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2275791..2276069
- synteny block?: BlockID0012060
- occurrence?: in 44% of 34 strains
htap (ap) : serogroup A prophage head-tail adaptor protein [1]
Most staphylococcal prophage require four small proteins to connect phage capsids to phage tails. Head-tail adaptor protein (HTAP) binds to the capsid portal protein and converts its conformational symmetry into the conformational symmetry of the tail tube proteins.
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0353
11819-97:
MS7_1464
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
SAAV_2028
HO 5096 0412:
SAEMRSA15_13700
JH1:
SaurJH1_1083
JH9:
SaurJH9_1063
JKD6008:
—
JKD6159:
—
JSNZ:
—
LGA251:
—
M013:
—
MRSA252:
SAR1515
MSHR1132:
—
MSSA476:
SAS0936
Mu3:
—
Mu50:
—
MW2:
MW1397
RF122:
—
ST398:
SAPIG0377
T0131:
—
TCH60:
HMPREF0772_11694
TW20:
—
USA300_TCH1516:
USA300HOU_1449
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSLEEIKLWLRIDYNFENDLIEGLIQSAKSELLLSGVPDYDKDDLEYPLFCTAIKYIIAR
NCTC8325 MSLEEIKLWLRIDYNFENDLIEGLIQSAKSELLLSGVPDYDKDDLEYPLFCTAIKYIIAR
USA300_FPR3757 MSLEEIKLWLRIDYNFENDLIEGLIQSAKSELLLSGVPDYDKDDLEYPLFCTAIKYIIAR
************************************************************
COL DYESRGYSNDQSRSKVFNEKGLQKMILKLKKW
NCTC8325 DYESRGYSNDQSRSKVFNEKGLQKMILKLKKW
USA300_FPR3757 DYESRGYSNDQSRSKVFNEKGLQKMILKLKKW
********************************
- ↑ Lia Cardarelli, Robert Lam, Ashleigh Tuite, Lindsay A Baker, Paul D Sadowski, Devon R Radford, John L Rubinstein, Kevin P Battaile, Nickolay Chirgadze, Karen L Maxwell, Alan R Davidson
The crystal structure of bacteriophage HK97 gp6: defining a large family of head-tail connector proteins.
J Mol Biol: 2010, 395(4);754-68
[PubMed:19895817] [WorldCat.org] [DOI] (I p)R Lurz, E V Orlova, D Günther, P Dube, A Dröge, F Weise, M van Heel, P Tavares
Structural organisation of the head-to-tail interface of a bacterial virus.
J Mol Biol: 2001, 310(5);1027-37
[PubMed:11501993] [WorldCat.org] [DOI] (P p)Paulo Tavares, Sophie Zinn-Justin, Elena V Orlova
Genome gating in tailed bacteriophage capsids.
Adv Exp Med Biol: 2012, 726;585-600
[PubMed:22297531] [WorldCat.org] [DOI] (P p)