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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001835000
- symbol?: —
- synonym:
- description?: terminase
- terminase
- phiSLT ORF 101-like protein, terminase, small subunit
- prophage L54a, terminase, small subunit
- terminase small subunit
- phage terminase, small subunit
- phage terminase, small subunit, , P27
- phage terminase small subunit
- phage terminase small subunit P27
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2286299..2286604
- synteny block?: BlockID0012110
- occurrence?: in 44% of 34 strains
⊟Additional information (user-provided)[edit | edit source]
terS : serogroup A cos-type terminase small subunit [1]
Prophage terminase complexes assist in transferring the prophage genome into phage capsids. The cos-type terminase small subunit recruits viral genome concatemers to the terminase-capsid complex and presents the cos site to the large terminase. The large terminase proceeds to load the viral genome into capsids, assisted by hnh nuclease cleavage at cos sites.
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0348
11819-97:
MS7_1469
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
SAAV_2033
HO 5096 0412:
SAEMRSA15_13750
JH1:
SaurJH1_1078
JH9:
SaurJH9_1058
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR1520
MSHR1132:
—
MSSA476:
SAS0931
Mu3:
—
Mu50:
—
MW2:
MW1402
RF122:
—
ST398:
SAPIG0372
T0131:
—
TCH60:
HMPREF0772_11689
TW20:
—
USA300_TCH1516:
USA300HOU_1454
VC40:
—
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
COL MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIIK
NCTC8325 MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVK
USA300_FPR3757 MKLTKKQLKEYIEDYKKSDDILINLYIETYEFYCRLRDELKNSDLMIEHTNKAGASNIVK
**********************************************************:*
COL NPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
NCTC8325 NPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
USA300_FPR3757 NPLSIELTKTVQTLNNLLKSMGLTAAQRKKIVQEEGGFGDY
*****************************************
⊟Literature[edit | edit source]
- ↑ Michael Feiss, Venigalla B Rao
The bacteriophage DNA packaging machine.
Adv Exp Med Biol: 2012, 726;489-509
[PubMed:22297528] [WorldCat.org] [DOI] (P p)Smriti Kala, Nichole Cumby, Paul D Sadowski, Batool Zafar Hyder, Voula Kanelis, Alan R Davidson, Karen L Maxwell
HNH proteins are a widespread component of phage DNA packaging machines.
Proc Natl Acad Sci U S A: 2014, 111(16);6022-7
[PubMed:24711378] [WorldCat.org] [DOI] (I p)