PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001872000
• symbol^?: glpT
• synonym:
• description^?: glycerol-3-phosphate transporter

  descriptions from strain specific annotations:

  • glycerol-3-phosphate transporter
  • glycerol-3-phosphate transporter, putative
  • MOP superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter
  • putative glycerol-3-phosphate transporter
• strand^?: -
• coordinates^?: 2366091..2367449
• synteny block^?: BlockID0012460
• occurrence^?: in 70% of 33 strains

⊟Orthologs

COL:
SACOL0407 (glpT)
N315:
SA0325 (glpT)
NCTC8325:
SAOUHSC_00317
Newman:
NWMN_0329
USA300_FPR3757:
SAUSA300_0337 (glpT)
04-02981:
SA2981_0335 (glpT)
08BA02176:
—
11819-97:
MS7_0326 (glpT)
6850:
RSAU_000282 (glpT)
71193:
—
ECT-R 2:
ECTR2_296 (glpT)
ED133:
—
ED98:
SAAV_0304 (glpT)
HO 5096 0412:
SAEMRSA15_02920 (glpT)
JH1:
SaurJH1_0395
JH9:
SaurJH9_0385
JKD6008:
SAA6008_00313 (glpT)
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_03100
MSSA476:
SAS0313
Mu3:
SAHV_0334 (glpT)
Mu50:
SAV0337 (glpT)
MW2:
MW0313 (glpT)
RF122:
—
ST398:
—
T0131:
SAT0131_00341
TCH60:
—
TW20:
SATW20_04040 (glpT)
USA300_TCH1516:
USA300HOU_0357 (glpT)
VC40:
SAVC_01430

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNFLKPAKHIKPLPENQIDDTYKRLRLQVFLGIFIGYAGYYLLRKNFSLAMPALQEQGFT
  N315            MNFLKPAKHIKPLPENQIDDTYKRLRLQVFLGIFIGYAGYYLLRKNFSLAMPALQEQGFT
  NCTC8325        MNFLKPAKHIKPLPENQIDDTYKRLRLQVFLGIFIGYAGYYLLRKNFSLAMPALQEQGFT
  Newman          MNFLKPAKHIKPLPENQIDDTYKRLRLQVFLGIFIGYAGYYLLRKNFSLAMPALQEQGFT
  USA300_FPR3757  MNFLKPAKHIKPLPENQIDDTYKRLRLQVFLGIFIGYAGYYLLRKNFSLAMPALQEQGFT
                  ************************************************************
  
  COL             KAELGFALSAVSIAYGFSKFFMGTVSDRSNARIFLVLGLALTAIVNLLMGFVPFFTSGIG
  N315            KAELGFALSAVSIAYGFSKFFMGTVSDRSNARIFLVLGLALTAIVNLLMGFVPFFTSGIG
  NCTC8325        KAELGFALSAVSIAYGFSKFFMGTVSDRSNARIFLVLGLALTAIVNLLMGFVPFFTSGIG
  Newman          KAELGFALSAVSIAYGFSKFFMGTVSDRSNARIFLVLGLALTAIVNLLMGFVPFFTSGIG
  USA300_FPR3757  KAELGFALSAVSIAYGFSKFFMGTVSDRSNARIFLVLGLALTAIVNLLMGFVPFFTSGIG
                  ************************************************************
  
  COL             IMFVLLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTALWNVAHNVGGGIMAPIAAWGIT
  N315            IMFVLLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTALWNVAHNVGGGIMAPIAAWGIT
  NCTC8325        IMFVLLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTALWNVAHNVGGGIMAPIAAWGIT
  Newman          IMFVLLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTALWNVAHNVGGGIMAPIAAWGIT
  USA300_FPR3757  IMFVLLFLNGWFQGMGWPPSGRVLVHWFSVSERGSKTALWNVAHNVGGGIMAPIAAWGIT
                  ************************************************************
  
  COL             TTAFINFGYLKGFEGVFIYPALLALIIAAISYVLIRDTPQSQGLPPIEIYKNDFATSDKK
  N315            TTAFINFGYLKGFEGVFIYPALLALIIAAISYVLIRDTPQSQGLPPIEIYKNDFATSDKK
  NCTC8325        TTAFINFGYLKGFEGVFIYPALLALIIAAISYVLIRDTPQSQGLPPIEIYKNDFATSDKK
  Newman          TTAFINFGYLKGFEGVFIYPALLALIIAAISYVLIRDTPQSQGLPPIEIYKNDFATSDKK
  USA300_FPR3757  TTAFINFGYLKGFEGVFIYPALLALIIAAISYVLIRDTPQSQGLPPIEIYKNDFATSDKK
                  ************************************************************
  
  COL             TLETELTTKEILFKYVLNNKWVWAIAFANIFVYFVRYGVLDWAPVYLSEEKHFDLKASGW
  N315            TLETELTTKEILFKYVLNNKWVWAIAFANIFVYFVRYGVLDWAPVYLSEEKHFDLKASGW
  NCTC8325        TLETELTTKEILFKYVLNNKWVWAIAFANIFVYFVRYGVLDWAPVYLSEEKHFDLKASGW
  Newman          TLETELTTKEILFKYVLNNKWVWAIAFANIFVYFVRYGVLDWAPVYLSEEKHFDLKASGW
  USA300_FPR3757  TLETELTTKEILFKYVLNNKWVWAIAFANIFVYFVRYGVLDWAPVYLSEEKHFDLKASGW
                  ************************************************************
  
  COL             AYFLYEWAGIPGTLLCGYISDKLFKGRRGPAGFFFMLGVTVFVLIYWLNPPGNAWLDNVS
  N315            AYFLYEWAGIPGTLLCGYISDKLFKGRRGPAGFFFMLGVTVFVLIYWLNPPGNAWLDNVS
  NCTC8325        AYFLYEWAGIPGTLLCGYISDKLFKGRRGPAGFFFMLGVTVFVLIYWLNPPGNAWLDNVS
  Newman          AYFLYEWAGIPGTLLCGYISDKLFKGRRGPAGFFFMLGVTVFVLIYWLNPPGNAWLDNVS
  USA300_FPR3757  AYFLYEWAGIPGTLLCGYISDKLFKGRRGPAGFFFMLGVTVFVLIYWLNPPGNAWLDNVS
                  ************************************************************
  
  COL             LIAIGFLIYGPVMLIGLQALDYVPKKAAGTAAGLTGLFGYLFGAVMANIVLGAVVDKFGW
  N315            LIAIGFLIYGPVMLIGLQALDYVPKKAAGTAAGLTGLFGYLFGAVMANIVLGAVVDKFGW
  NCTC8325        LIAIGFLIYGPVMLIGLQALDYVPKKAAGTAAGLTGLFGYLFGAVMANIVLGAVVDKFGW
  Newman          LIAIGFLIYGPVMLIGLQALDYVPKKAAGTAAGLTGLFGYLFGAVMANIVLGAVVDKFGW
  USA300_FPR3757  LIAIGFLIYGPVMLIGLQALDYVPKKAAGTAAGLTGLFGYLFGAVMANIVLGAVVDKFGW
                  ************************************************************
  
  COL             DVGFILLTAISVFAMLSFILTWNKVGQETVHH
  N315            DVGFILLTAISVFAMLSFILTWNKVGQETVHH
  NCTC8325        DVGFILLTAISVFAMLSFILTWNKVGQETVHH
  Newman          DVGFILLTAISVFAMLSFILTWNKVGQETVHH
  USA300_FPR3757  DVGFILLTAISVFAMLSFILTWNKVGQETVHH
                  ********************************