PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001879000
• symbol^?: —
• synonym:
• description^?: nitrogen regulation protein NIFR3
• strand^?: +
• coordinates^?: 2371414..2371947
• synteny block^?: BlockID0012530
• occurrence^?: in 27% of 33 strains

⊟Orthologs

COL:
SACOL0412
N315:
—
NCTC8325:
—
Newman:
NWMN_0334
USA300_FPR3757:
SAUSA300_0342
04-02981:
—
08BA02176:
C248_0396
11819-97:
MS7_0331
6850:
—
71193:
ST398NM01_0422
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
SAPIG0422
T0131:
—
TCH60:
HMPREF0772_10153
TW20:
—
USA300_TCH1516:
USA300HOU_0362
VC40:
—

⊟Genome Viewer

COL
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ---------------------------------MIGNLDINQSNRHYNAYWRGPNKEADE
  Newman          ---------------------------------MIGNLDINQSNRHYNAYWRGPNKEADE
  USA300_FPR3757  MSSASFNSILALFCRIFKYKFGMNNKVVIKLSCVIGNLDINQSNRHYNAYWRGPNKEADE
                                                   :**************************
  
  COL             KSAYNNVQVGDGPQHREIGSVISTDNASWRGPNIENFEKKFYKQCKLAGPQHREFRKEIL
  Newman          KSAYNNVQVGDGPQHREIGSVISTDNASWRGPNIENFEKKFYKQCKLAGPQHREFRKEIL
  USA300_FPR3757  KSAYNNVQVGDGPQHREIGSVISTDNASWRGPNIENFEKKFYKQCKLAGPQHREFRKEIL
                  ************************************************************
  
  COL             QAMQVGEGQQI
  Newman          QAMQVGEGQQI
  USA300_FPR3757  QAMQVGEGQQI
                  ***********