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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002108000
- symbol?: ssl3
- synonym:
- description?: staphylococcal superantigen-like protein 3
- staphylococcal superantigen-like protein 3
- superantigen-like protein
- superantigen-like protein SSL3
- exotoxin
- Exotoxin 8
- staphylococcal/Streptococcal toxin, beta-grasp domain protein
- Staphylococcal enterotoxin-like toxin
- staphylococcal exotoxin
- superantigen-like protein 11
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2590789..2592102
- synteny block?: BlockID0014140
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0398 (set8)
08BA02176:
C248_0475
11819-97:
MS7_0399
6850:
RSAU_000354
71193:
ST398NM01_0493
ECT-R 2:
ECTR2_359
ED133:
SAOV_0442
ED98:
SAAV_0367
HO 5096 0412:
SAEMRSA15_03550
JH1:
SaurJH1_0459
JH9:
SaurJH9_0447
JKD6008:
SAA6008_00424 (set8)
JKD6159:
SAA6159_00377
LGA251:
SARLGA251_03620
M013:
M013TW_0385
MRSA252:
SAR0425
MSHR1132:
SAMSHR1132_03740
MSSA476:
SAS0386
Mu3:
SAHV_0421 (set8)
Mu50:
SAV0424 (set8)
MW2:
MW0384 (set18)
RF122:
SAB0378 (set9)
ST398:
SAPIG0493
T0131:
SAT0131_00460
TCH60:
HMPREF0772_10092
TW20:
SATW20_04980
USA300_TCH1516:
USA300HOU_0424 (set18)
VC40:
SAVC_01745
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKMRTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANS
N315 MNMKTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANS
NCTC8325 MKMRTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANS
Newman MKMRTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANS
USA300_FPR3757 MKMRTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANS
*:*:********************************************************
COL ATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKTLNISATPAPKQEQSQ
N315 ATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQ
NCTC8325 ATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKTLNISATPAPKQEQSQ
Newman ATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKTLNISATPAPKQEQSQ
USA300_FPR3757 ATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKTLNISATPAPKQEQSQ
********************************************:***************
COL TTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSF
N315 TTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSF
NCTC8325 TTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSF
Newman TTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSF
USA300_FPR3757 TTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSF
************************************************************
COL EFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ
N315 EFEKQFGFLLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ
NCTC8325 EFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ
Newman EFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ
USA300_FPR3757 EFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ
********:***************************************************
COL LKKYSVGGITKTNSKKVNHKVELSITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQ
N315 LKKYSVGGITKTNSKKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQ
NCTC8325 LKKYSVGGITKTNSKKVNHKVELSITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQ
Newman LKKYSVGGITKTNSKKVNHKVELSITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQ
USA300_FPR3757 LKKYSVGGITKTNSKKVNHKVELSITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQ
*****************:**.***:***********************************
COL LIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMA----GTNIDNIEVNIK
N315 LIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNIK
NCTC8325 LIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMADVIDGTNIDNIEVNIK
Newman LIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMA----GTNIDNIEVNIK
USA300_FPR3757 LIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMA----GTNIDNIEVNIK
**************************************** *****:******