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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002129000
- symbol?: ssl11
- synonym:
- description?: staphylococcal superantigen-like protein 11
- staphylococcal superantigen-like protein 11
- superantigen-like protein
- Exotoxin 15
- exotoxin
- Exotoxin type C
- staphylococcal/Streptococcal toxin, beta-grasp domain protein
- Staphylococcal enterotoxin-like toxin
- staphylococcal exotoxin
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2623073..2623774
- synteny block?: BlockID0014350
- occurrence?: in 94% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0409 (set15)
08BA02176:
C248_0484
11819-97:
MS7_0408 (set15)
6850:
RSAU_000364
71193:
ST398NM01_0501
ECT-R 2:
ECTR2_368
ED133:
SAOV_0453
ED98:
SAAV_0376
HO 5096 0412:
SAEMRSA15_03630
JH1:
SaurJH1_0468
JH9:
SaurJH9_0456
JKD6008:
SAA6008_00436 (set15)
JKD6159:
—
LGA251:
SARLGA251_03710
M013:
M013TW_0394
MRSA252:
SAR0435
MSHR1132:
—
MSSA476:
SAS0396
Mu3:
SAHV_0431 (set15)
Mu50:
SAV0433 (set15)
MW2:
MW0394 (set26)
RF122:
SAB0386 (set1)
ST398:
SAPIG0501
T0131:
SAT0131_00472 (tyrS)
TCH60:
HMPREF0772_10084
TW20:
SATW20_05100
USA300_TCH1516:
USA300HOU_0435 (set)
VC40:
SAVC_01795
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYNRPFFEYTNQSGY
N315 MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYKGRGFELTNVTGY
NCTC8325 MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYNRPFFEYTNQSGY
Newman MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYNRPFFEYTNQSGY
USA300_FPR3757 MKLKNIAKASLALGILTTGMITTTAQPVKASTLEVRSQATQDLSEYYNRPFFEYTNQSGY
***********************************************: ** ** :**
COL KEEGKVTFTPNYQLIDVTLTGNEKQNFGED--ISNVDIFVVRENSDRSGNTASIGGITKT
N315 KYGNKVTFIDNSQQIDVTLTGNEKLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKT
NCTC8325 KEEGKVTFTPNYQLIDVTLTGNEKQNFGED--ISNVDIFVVRENSDRSGNTASIGGITKT
Newman KEEGKVTFTPNYQLIDVTLTGNEKQNFGED--ISNVDIFVVRENSDRSGNTASIGGITKT
USA300_FPR3757 KEEGKVTFTPNYQLIDVTLTGNEKQNFGED--ISNVDIFVVRENSDRSGNTASIGGITKT
* .**** * * ********** .. :* :****:*****.**:*. *:********
COL NGSNYIDKVKDVNLIITKNIDSVTSTSTSSTYTINKEEISLKELDFKLRKHLIDKHNLYK
N315 NGTQHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEISLKELDFKLRKHLIDKHDLYK
NCTC8325 NGSNYIDKVKDVNLIITKNIDSVTSTSTSSTYTINKEEISLKELDFKLRKHLIDKHNLYK
Newman NGSNYIDKVKDVNLIITKNIDSVTSTSTSSTYTINKEEISLKELDFKLRKHLIDKHNLYK
USA300_FPR3757 NGSNYIDKVKDVNLIITKNIDSVTSTSTSSTYTINKEEISLKELDFKLRKHLIDKHNLYK
**::: *.*::*** ::*. .. *:: **. *:* *********************:***
COL TEPKDSKIRITMKDGGFYTFELNKKLQTHRMGDVIDGRNIEKIEVNL
N315 TEPKDSKIRITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL
NCTC8325 TEPKDSKIRITMKDGGFYTFELNKKLQTHRMGDVIDGRNIEKIEVNL
Newman TEPKDSKIRITMKDGGFYTFELNKKLQTHRMGDVIDGRNIEKIEVNL
USA300_FPR3757 TEPKDSKIRITMKDGGFYTFELNKKLQTHRMGDVIDGRNIEKIEVNL
*************:**:**********.*****.**.**********