PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002155000
• symbol^?: zagA
• synonym:
• description^?: GTP-binding protein

  descriptions from strain specific annotations:

  • GTP-binding protein
  • cobalamin synthesis protein
  • cobalamin synthesis protein, putative
  • putative cobalamin synthesis protein
  • Putative GTPases (G3E family)
  • cobalamin (vitamin B12) biosynthesis protein
  • cobalamin synthesis protein, P47K
  • cobalamin synthesis protein P47K
  • cobW/HypB/UreG, nucleotide-binding domain protein
  • CobW/P47K family protein
  • Low-affinity zinc transport protein
  • putative metal chaperone, GTPase
  • YciC protein
• strand^?: +
• coordinates^?: 2665120..2666322
• synteny block^?: BlockID0014590
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0491
N315:
SA0410
NCTC8325:
SAOUHSC_00410
Newman:
NWMN_0417 (cobW)
USA300_FPR3757:
SAUSA300_0424
04-02981:
SA2981_0426
08BA02176:
C248_0501
11819-97:
MS7_0424
6850:
RSAU_000380
71193:
ST398NM01_0517
ECT-R 2:
ECTR2_385
ED133:
SAOV_0466
ED98:
SAAV_0394
HO 5096 0412:
SAEMRSA15_03750
JH1:
SaurJH1_0485
JH9:
SaurJH9_0473
JKD6008:
SAA6008_00453 (cobW)
JKD6159:
SAA6159_00402 (cobW)
LGA251:
SARLGA251_03850
M013:
M013TW_0413
MRSA252:
SAR0450
MSHR1132:
SAMSHR1132_03960
MSSA476:
SAS0408
Mu3:
SAHV_0448
Mu50:
SAV0450
MW2:
MW0406
RF122:
SAB0401
ST398:
SAPIG0517
T0131:
SAT0131_00488
TCH60:
HMPREF0772_10072
TW20:
SATW20_05190
USA300_TCH1516:
USA300HOU_0452 (cobW1)
VC40:
SAVC_01845

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTD
  N315            MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTD
  NCTC8325        MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTD
  Newman          MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTD
  USA300_FPR3757  MAKIPVTVLSGYLGSGKTTLLNHILQNREGRRIAVIVNDMSEVNIDKDLVADGGGLSRTD
                  ************************************************************
  
  COL             EKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELG
  N315            EKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELG
  NCTC8325        EKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELG
  Newman          EKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELG
  USA300_FPR3757  EKLVELSNGCICCTLRDDLLKEVERLVKKGGIDQIVIESTGISEPVPVAQTFSYIDDELG
                  ************************************************************
  
  COL             IDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDETDERSIADLLIDQVEFCDVL
  N315            IDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDETDERSIADLLIDQVEFCDVL
  NCTC8325        IDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDETDERSIADLLIDQVEFCDVL
  Newman          IDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDETDERSIADLLIDQVEFCDVL
  USA300_FPR3757  IDLTAICRLDTMVTVVDANRFVHDINSEDLLMDRDQSVDETDERSIADLLIDQVEFCDVL
                  ************************************************************
  
  COL             IINKIDLISEEELAKLEKMLSALQPTAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
  N315            IINKIDLISEEELAKLEKVLSALQPIAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
  NCTC8325        IINKIDLISEEELAKLEKMLSALQPTAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
  Newman          IINKIDLISEEELAKLEKMLSALQPTAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
  USA300_FPR3757  IINKIDLISEEELAKLEKMLSALQPTAKIIKTTNSEVDLKEVLNTQRFDFEKASESAGWI
                  ******************:****** **********************************
  
  COL             KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMPNNVVRSKGIVWLAQYN
  N315            KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMSNNVVRSKGIVWLAQYN
  NCTC8325        KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMPNNVVRSKGIVWLAQYN
  Newman          KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMPNNVVRSKGIVWLAQYN
  USA300_FPR3757  KELESGGHASHTPETEEYGISSFVYKRRLPFHAKRFNDWLESMPNNVVRSKGIVWLAQYN
                  *******************************************.****************
  
  COL             HVACLLSQAGSSCNIHPVTYWVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGT
  N315            HVACLLSQAGSSCNIHPVTYWVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGT
  NCTC8325        HVACLLSQAGSSCNIHPVTYWVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGT
  Newman          HVACLLSQAGSSCNIHPVTYWVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGT
  USA300_FPR3757  HVACLLSQAGSSCNIHPVTYWVASMSEAQQTQILAERQDVAAEWDPEYGDRHTQFVIIGT
                  ************************************************************
  
  COL             ELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR
  N315            ELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR
  NCTC8325        ELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR
  Newman          ELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR
  USA300_FPR3757  ELDEEKLTKELDACLVNAQEIDADWQQFEDPYQWQIRPAR
                  ****************************************