PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002160000
• symbol^?: psmα3
• synonym: psmA3
• description^?: Phenol-soluble modulin alpha 3 peptide

  descriptions from strain specific annotations:

  • Phenol-soluble modulin alpha 3 peptide
  • phenol-soluble modulin alpha 3
  • phenol-soluble modulin PSM-alpha-3
  • cytosolic toxin PSM alpha3
• strand^?: -
• coordinates^?: 2667180..2667249
• synteny block^?: BlockID0014630
• occurrence^?: in 30% of 33 strains

⊟Orthologs

COL:
SACOL0493.2 (psmα3)
N315:
SA0410.3 (psmα3)
NCTC8325:
SAOUHSC_00411.2 (psmα3)
Newman:
NWMN_0417.2 (psmα3)
USA300_FPR3757:
SAUSA300_0424.2 (psmα3)
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
RSAU_000382 (psmA3)
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
SAA6008_09901
JKD6159:
SAA6159_02609
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_03962
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
SATW20_05202
USA300_TCH1516:
—
VC40:
—

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MEFVAKLFKFFKDLLGKFLGNN
  N315            MEFVAKLFKFFKDLLGKFLGNN
  NCTC8325        MEFVAKLFKFFKDLLGKFLGNN
  Newman          MEFVAKLFKFFKDLLGKFLGNN
  USA300_FPR3757  MEFVAKLFKFFKDLLGKFLGNN
                  **********************