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Summary[edit | edit source]

  • pan ID?: SAUPAN002273000
  • symbol?: rrsB
  • synonym:
  • description?: 16S ribosomal RNA
  • strand?: +
  • coordinates?: 2771799..2774483
  • synteny block?: BlockID0015720
  • occurrence?: in 74% of 34 strains

rrsB : 16S ribosomal RNA [1]

• A crystal structure is available : 6YEF

Staphylococcal 16S rRNA is modified by methylation at guanine(535) by rsmG, dimethylation at cytosine(1412) by rsmH and rsmI, and dimethylation at both adenosine(1529) and adenosine(1530) by ksgA.

Orthologs[edit | edit source]

    COL:
    SACOL_Sa16SB (rrsB)
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_rRNA05
    08BA02176:
    C248_0584
    11819-97:
    6850:
    RSAU_000466
    71193:
    ST398NM01_r057
    ECT-R 2:
    ECTR2_467
    ED133:
    ED98:
    SAAV_0474
    HO 5096 0412:
    SAEMRSA15_rRNA0005
    JH1:
    SaurJH1_R0021
    JH9:
    SaurJH9_R0017
    JKD6008:
    SAA6008_r05
    JKD6159:
    JSNZ:
    JSNZ_000468
    LGA251:
    SARLGA251_r05
    M013:
    MRSA252:
    SARr005
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_r0005
    Mu50:
    SAVrRNA05
    MW2:
    MWrRNA05
    RF122:
    ST398:
    T0131:
    TCH60:
    HMPREF0772_r10003
    TW20:
    SATW20_r050
    USA300_TCH1516:
    USA300HOU_r0005 (rrs2)
    VC40:
    SAVC_r12603

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:

  1. Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
    Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
    FEBS Lett: 2020, 594(21);3551-3567
    [PubMed:32852796] [WorldCat.org] [DOI] (I p)