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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002359000
- symbol?: ung
- synonym:
- description?: uracil-DNA glycosylase
- uracil-DNA glycosylase
- uracil-DNA glycosylase, putative
- putative uracil-DNA glycosylase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2898829..2899485
- synteny block?: BlockID0016580
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0558 (ung)
08BA02176:
C248_0656 (ung)
11819-97:
MS7_0570 (ung)
6850:
RSAU_000532 (ung)
71193:
ST398NM01_0655
ECT-R 2:
ECTR2_534 (ung)
ED133:
SAOV_0615
ED98:
SAAV_0543 (ung)
HO 5096 0412:
SAEMRSA15_05080 (ung)
JH1:
SaurJH1_0618
JH9:
SaurJH9_0604
JKD6008:
SAA6008_00588 (ung)
JKD6159:
SAA6159_00534 (ung)
LGA251:
SARLGA251_05160 (ung)
M013:
M013TW_0568
MRSA252:
SAR0586 (ung)
MSHR1132:
SAMSHR1132_05250
MSSA476:
SAS0539
Mu3:
SAHV_0579 (ung)
Mu50:
SAV0581 (ung)
MW2:
MW0536 (ung)
RF122:
SAB0531 (ung)
ST398:
SAPIG0655 (ung)
T0131:
SAT0131_00642
TCH60:
HMPREF0772_12608 (ung)
TW20:
SATW20_06500 (ung)
USA300_TCH1516:
USA300HOU_0574 (ung)
VC40:
SAVC_02490
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
N315 MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
NCTC8325 MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
Newman MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
USA300_FPR3757 MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDP
************************************************************
COL YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
N315 YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
NCTC8325 YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
Newman YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
USA300_FPR3757 YHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPHLQDWAREGVLLLNTVLT
************************************************************
COL VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
N315 VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
NCTC8325 VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
Newman VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
USA300_FPR3757 VRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVH
************************************************************
COL PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
N315 PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
NCTC8325 PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
Newman PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
USA300_FPR3757 PSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
**************************************