Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002361000
- symbol?: —
- synonym:
- description?: DUF423 domain-containing protein
- DUF423 domain-containing protein
- hypothetical protein with DUF423
- membrane protein
- membrane spanning protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2900000..2900368
- synteny block?: BlockID0016600
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0560
08BA02176:
C248_0658
11819-97:
MS7_0572
6850:
RSAU_000534
71193:
ST398NM01_0657
ECT-R 2:
ECTR2_536
ED133:
SAOV_0617
ED98:
SAAV_0545
HO 5096 0412:
SAEMRSA15_05100
JH1:
SaurJH1_0620
JH9:
SaurJH9_0606
JKD6008:
SAA6008_00590
JKD6159:
SAA6159_00536
LGA251:
SARLGA251_05180
M013:
M013TW_0570
MRSA252:
SAR0588
MSHR1132:
SAMSHR1132_05270
MSSA476:
SAS0541
Mu3:
SAHV_0581
Mu50:
SAV0583
MW2:
MW0538
RF122:
SAB0533
ST398:
SAPIG0657
T0131:
SAT0131_00644
TCH60:
HMPREF0772_12606
TW20:
SATW20_06520
USA300_TCH1516:
USA300HOU_0576
VC40:
SAVC_02500
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISG
N315 MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISG
NCTC8325 MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISG
Newman MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISG
USA300_FPR3757 MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISG
************************************************************
COL TTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKF
N315 TTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKF
NCTC8325 TTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKF
Newman TTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKF
USA300_FPR3757 TTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKF
************************************************************
COL AG
N315 AG
NCTC8325 AG
Newman AG
USA300_FPR3757 AG
**