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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002447000
- symbol?: —
- synonym:
- description?: membrane spanning protein
- membrane spanning protein
- staphylococcus aureus paralogous family
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2961040..2963295
- synteny block?: BlockID0016850
- occurrence?: in 42% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_0674
11819-97:
—
6850:
—
71193:
ST398NM01_0671
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
SAA6008_00606
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS0558
Mu3:
—
Mu50:
—
MW2:
MW0554
RF122:
—
ST398:
SAPIG0671
T0131:
SAT0131_00663
TCH60:
—
TW20:
SATW20_06680
USA300_TCH1516:
USA300HOU_0594
VC40:
SAVC_02580
⊟Genome Viewer[edit | edit source]
COL | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLCETEIINKNPKYRVIKYDDEYLMVDVIRTWLVYFFPFINWFIPKRCAKISREEYEKLN
NCTC8325 ------------------------MVDVIRTWLVYFFPFINWFIPKRCAKISREEYEKLN
Newman MLCETEIINKNPKYRVIKYDDEYLMVDVIRTWLVYFFPFINWFIPKRCAKISREEYEKLN
USA300_FPR3757 ------------------------MVDVIRTWLVYFFPFINWFIPKRCAKISREEYEKLN
************************************
COL TVKPVKNKNFWPVVGGTILLGATSRKYIHLLNIQLEKRSVIFICFVVFLCILIFFVLLNR
NCTC8325 TVKPVKNKNFWPVVGGTILLGATSRKYIHLLNIQLEKRSVIFICFVVFLCILIFFVLLNR
Newman TVKPVKNKNFWPVVGGTILLGATSRKYIHLLNIQLEKRSVIFICFVVFLCILIFFVLLNR
USA300_FPR3757 TVKPVKNKNFWPVVGGTILLGATSRKYIHLLNIQLEKRSVIFICFVVFLCILIFFVLLNR
************************************************************
COL KLKLKVFDNKKEEQKIILVPTLKNAVLILYGYLLIGGMSILALSMLLTLENQNLITFIAW
NCTC8325 KLKLKVFDNKKEEQKIILVPTLKNAVLILYGYLLIGGMSILALSMLLTLENQNLITFIAW
Newman KLKLKVFDNKKEEQKIILVPTLKNAVLILYGYLLIGGMSILALSMLLTLENQNLITFIAW
USA300_FPR3757 KLKLKVFDNKKEEQKIILVPTLKNAVLILYGYLLIGGMSILALSMLLTLENQNLITFIAW
************************************************************
COL GMGLMLFFLMNITLIVNKTVKVIKR
NCTC8325 GMGLMLFFLMNITLIVNKTVKVIKR
Newman GMGLMLFFLMNITLIVNKTVKVIKR
USA300_FPR3757 GMGLMLFFLMNITLIVNKTVKVIKR
*************************