PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002540000
• symbol^?: vraF
• synonym:
• description^?: ABC transporter ATP-binding protein

  descriptions from strain specific annotations:

  • ABC transporter ATP-binding protein
  • ABC transporter ATP-binding protein VraF
  • bacitracin ABC transporter ATP-binding protein, putative
  • Bacitracin export ATP-binding protein BceA
  • ABC superfamily ATP binding cassette transporter, ABC protein
  • ABC transporter, ATP-binding protein VraF
  • ABC transporter family protein
  • antimicrobial peptide ABC transporter ATPase
  • ATP-binding ABC transport protein
  • Bacitracin ABC transporter ATP binding protein VraF
  • Bacitracin transport ATP-binding protein
  • putative ABC transporter protein
• strand^?: +
• coordinates^?: 3051000..3051761
• synteny block^?: BlockID0017760
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0718
N315:
SA0616 (vraF)
NCTC8325:
SAOUHSC_00667
Newman:
NWMN_0630 (vraF)
USA300_FPR3757:
SAUSA300_0647
04-02981:
SA2981_0637 (vraF)
08BA02176:
C248_0745
11819-97:
MS7_0711
6850:
RSAU_000637 (bceA)
71193:
ST398NM01_0739
ECT-R 2:
ECTR2_612
ED133:
SAOV_0695
ED98:
SAAV_0623
HO 5096 0412:
SAEMRSA15_05870
JH1:
SaurJH1_0699
JH9:
SaurJH9_0684
JKD6008:
SAA6008_00677
JKD6159:
SAA6159_00615
LGA251:
SARLGA251_05940 (vraF)
M013:
M013TW_0648
MRSA252:
SAR0671
MSHR1132:
SAMSHR1132_06070
MSSA476:
SAS0626
Mu3:
SAHV_0658 (vraF)
Mu50:
SAV0661 (vraF)
MW2:
MW0623 (vraF)
RF122:
SAB0610
ST398:
SAPIG0739
T0131:
SAT0131_00731
TCH60:
HMPREF0772_12527
TW20:
SATW20_07360 (vraF)
USA300_TCH1516:
USA300HOU_0682 (vraF)
VC40:
SAVC_02935

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGSGKTTLLNVLSSIDYIS
  N315            MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGSGKTTLLNVLSSIDYIS
  NCTC8325        MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGSGKTTLLNVLSSIDYIS
  Newman          MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGSGKTTLLNVLSSIDYIS
  USA300_FPR3757  MAILEVKQLTKIYGTKKMAQEVLRDINMSIEEGEFIAIMGPSGSGKTTLLNVLSSIDYIS
                  ************************************************************
  
  COL             QGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNLLHTLTVKENIMLPLTVQKLDKEHM
  N315            QGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNLLHTLTVKENIMLPLTVQKLDKEHM
  NCTC8325        QGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNLLHTLTVKENIMLPLTVQKLDKEHM
  Newman          QGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNLLHTLTVKENIMLPLTVQKLDKEHM
  USA300_FPR3757  QGSITLKGKKLEKLSNKELSDIRKHDIGFIFQEYNLLHTLTVKENIMLPLTVQKLDKEHM
                  ************************************************************
  
  COL             LNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFITLPSIIFADEPTGALDSKSTQ
  N315            LNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFITLPSIIFADEPTGALDSKSTQ
  NCTC8325        LNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFITLPSIIFADEPTGALDSKSTQ
  Newman          LNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFITLPSIIFADEPTGALDSKSTQ
  USA300_FPR3757  LNRYEKVAEALNILDISDKYPSELSGGQRQRTSAARAFITLPSIIFADEPTGALDSKSTQ
                  ************************************************************
  
  COL             DLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKDGQIFTELYQGDDDKHTFFKEII
  N315            DLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKDGQIFTELYQGDDDKHTFFKEII
  NCTC8325        DLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKDGQIFTELYQGDDDKHTFFKEII
  Newman          DLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKDGQIFTELYQGDDDKHTFFKEII
  USA300_FPR3757  DLLKRLTRMNEAFKSTIIMVTHDPVAASYANRVVMLKDGQIFTELYQGDDDKHTFFKEII
                  ************************************************************
  
  COL             RVQSVLGGVNYDL
  N315            RVQSVLGGVNYDL
  NCTC8325        RVQSVLGGVNYDL
  Newman          RVQSVLGGVNYDL
  USA300_FPR3757  RVQSVLGGVNYDL
                  *************