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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002565000
- symbol?: —
- synonym:
- description?: DUF188 domain-containing protein
- DUF188 domain-containing protein
- YaiI/YqxD family protein
- EMG2 protein
- protein BCE33L2782
- UPF0178 protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3076427..3076885
- synteny block?: BlockID0018010
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0658
08BA02176:
C248_0766
11819-97:
MS7_0733
6850:
RSAU_000657
71193:
ST398NM01_0759
ECT-R 2:
ECTR2_633
ED133:
SAOV_0716c
ED98:
SAAV_0644
HO 5096 0412:
SAEMRSA15_06070
JH1:
SaurJH1_0721
JH9:
SaurJH9_0705
JKD6008:
SAA6008_00698
JKD6159:
SAA6159_00636
LGA251:
SARLGA251_06140
M013:
M013TW_0668
MRSA252:
SAR0734
MSHR1132:
SAMSHR1132_06270
MSSA476:
SAS0646
Mu3:
SAHV_0678
Mu50:
SAV0681
MW2:
MW0643
RF122:
SAB0630c
ST398:
SAPIG0759
T0131:
SAT0131_00752 (fadA)
TCH60:
HMPREF0772_12506
TW20:
SATW20_07560
USA300_TCH1516:
USA300HOU_0704
VC40:
SAVC_03035
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPPHVSTLYVDDGPDAVDY
N315 MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPPHVSTLYVDDGPDAVDY
NCTC8325 MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPPHVSTLYVDDGPDAVDY
Newman MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPPHVSTLYVDDGPDAVDY
USA300_FPR3757 MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPPHVSTLYVDDGPDAVDY
************************************************************
COL KIVQLSTKDDIVVTQDYGLASLLVDKVLIVMHHNGKIYNSKNIQQLLDKRYMNAQIRKQG
N315 KIVQLSTKDDIVVTQDYGLASLLVDKVLIVMHHNGKIYNSKNIQQLLDKRYINAQIRKQG
NCTC8325 KIVQLSTKDDIVVTQDYGLASLLVDKVLIVMHHNGKIYNSKNIQQLLDKRYMNAQIRKQG
Newman KIVQLSTKDDIVVTQDYGLASLLVDKVLIVMHHNGKIYNSKNIQQLLDKRYMNAQIRKQG
USA300_FPR3757 KIVQLSTKDDIVVTQDYGLASLLVDKVLIVMHHNGKIYNSKNIQQLLDKRYMNAQIRKQG
***************************************************:********
COL GRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD
N315 GRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD
NCTC8325 GRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD
Newman GRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD
USA300_FPR3757 GRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD
********************************