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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002607000
- symbol?: —
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- ABC-F family ATP-binding cassette domain-containing protein
- Dual ATPase-domain ABC transporter
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter, ATP-binding protein
- ABC transporter ATP-binding protein uup
- ABC transporter family protein
- ATPase component of ABC transporters with duplicated ATPase domains
- ATPase components of ABC transporterswith duplicated ATPase domains
- ATP-binding ABC transporter protein
- heme ABC transporter ATP-binding protein CcmA
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3116479..3118362
- synteny block?: BlockID0018430
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0697
08BA02176:
C248_0804
11819-97:
MS7_0771
6850:
RSAU_000694
71193:
ST398NM01_0797
ECT-R 2:
ECTR2_670
ED133:
SAOV_0754
ED98:
SAAV_0681
HO 5096 0412:
SAEMRSA15_06460
JH1:
SaurJH1_0760
JH9:
SaurJH9_0743
JKD6008:
SAA6008_00735
JKD6159:
SAA6159_00674
LGA251:
SARLGA251_06530
M013:
M013TW_0706
MRSA252:
SAR0773
MSHR1132:
SAMSHR1132_06650
MSSA476:
SAS0685
Mu3:
SAHV_0717
Mu50:
SAV0720
MW2:
MW0682
RF122:
SAB0669
ST398:
SAPIG0797
T0131:
SAT0131_00789
TCH60:
HMPREF0772_12467
TW20:
SATW20_07950
USA300_TCH1516:
USA300HOU_0743
VC40:
SAVC_03230
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTA
N315 --MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTA
NCTC8325 MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTA
Newman MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTA
USA300_FPR3757 MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTA
**********************************************************
COL NVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFK
N315 NVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFK
NCTC8325 NVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFK
Newman NVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFK
USA300_FPR3757 NVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFK
************************************************************
COL RMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDL
N315 RMIDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDL
NCTC8325 RMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDL
Newman RMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDL
USA300_FPR3757 RMMDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDL
**:*********************************************************
COL LLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
N315 LLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
NCTC8325 LLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
Newman LLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
USA300_FPR3757 LLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGN
************************************************************
COL YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQ
N315 YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQ
NCTC8325 YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQ
Newman YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQ
USA300_FPR3757 YESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQ
************************************************************
COL QYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKT
N315 QYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKT
NCTC8325 QYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKT
Newman QYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKT
USA300_FPR3757 QYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLIEHLTEIIQKGERIGVVGPNGAGKT
***********************************:************************
COL TLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREENEIAKEKDGTSV
N315 TLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREESEVAKEKDGTSV
NCTC8325 TLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREESEIAKEKDGTSV
Newman TLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREENEIAKEKDGTSV
USA300_FPR3757 TLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREENEIAKEKDGTSV
************************************************.*:*********
COL SITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
N315 SITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
NCTC8325 SITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
Newman SITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
USA300_FPR3757 SITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTI
************************************************************
COL LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKST
N315 LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKST
NCTC8325 LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKST
Newman LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKST
USA300_FPR3757 LEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKST
************************************************************
COL LKQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELN
N315 LKQQSKSYTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELN
NCTC8325 LKQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELN
Newman LKQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELN
USA300_FPR3757 LKQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELN
******* ****************************************************
COL EEKEQLEIQYDLDITRWSELEEIKEQQ
N315 EEKEQLEIQYDLDITRWSELEEIKEQQ
NCTC8325 EEKEQLEIQYDLDITRWSELEEIKEQQ
Newman EEKEQLEIQYDLDITRWSELEEIKEQQ
USA300_FPR3757 EEKEQLEIQYDLDITRWSELEEIKEQQ
***************************