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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002639000
- symbol?: sstC
- synonym:
- description?: iron ABC transporter ATP-binding protein
- iron ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- iron compound ABC transporter, ATP-binding protein, putative
- iron compound ABC transporter ATP-binding protein
- putative iron compound ABC transporter ATP-binding protein
- Iron compound ABC uptake transporter ATP-binding protein
- ABC transporter family protein
- ferric anguibactin transport ATP-binding protein
- ferrichrome ABC transporter ATP-binding protein
- ferrichrome transport ATP-binding protein FhuC
- iron (Fe+3) ABC superfamily ATP binding cassette transporter, ABC protein
- iron (Fe+3) ABC transporter ATP-binding protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3139370..3140131
- synteny block?: BlockID0018740
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0713
08BA02176:
C248_0822 (sstC)
11819-97:
MS7_0786
6850:
RSAU_000710
71193:
ST398NM01_0812
ECT-R 2:
ECTR2_686
ED133:
SAOV_0772
ED98:
SAAV_0697
HO 5096 0412:
SAEMRSA15_06610 (sstC)
JH1:
SaurJH1_0776
JH9:
SaurJH9_0759
JKD6008:
SAA6008_00750 (sstC)
JKD6159:
SAA6159_00691 (sstC)
LGA251:
SARLGA251_06680 (sstC)
M013:
M013TW_0721
MRSA252:
SAR0789 (sstC)
MSHR1132:
SAMSHR1132_06800
MSSA476:
SAS0700
Mu3:
SAHV_0732
Mu50:
SAV0735
MW2:
MW0697
RF122:
SAB0687 (sstC)
ST398:
SAPIG0812
T0131:
SAT0131_00807
TCH60:
HMPREF0772_12449 (sstC)
TW20:
SATW20_08100 (sstC)
USA300_TCH1516:
USA300HOU_0761
VC40:
SAVC_03310
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIQVENLTKTINNQMILEDISIDIEKGKLTSLIGPNGAGKSTLLSAICRLIRFENGEVKI
N315 MIQVENLTKTINNQMILEDISIDIEKGKLTSLIGPNGAGKSTLLSAICRLIRFDNGEVKI
NCTC8325 MIQVENLTKTINNQMILEDISIDIEKGKLTSLIGPNGAGKSTLLSAICRLIRFENGEVKI
Newman MIQVENLTKTINNQMILEDISIDIEKGKLTSLIGPNGAGKSTLLSAICRLIRFENGEVKI
USA300_FPR3757 MIQVENLTKTINNQMILEDISIDIEKGKLTSLIGPNGAGKSTLLSAICRLIRFENGEVKI
*****************************************************:******
COL DGQLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNFGRFPYSKGRLTKEDHDIVNDAL
N315 DGQLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNFGRFPYSKGRLTKEDHDIVNDAL
NCTC8325 DGQLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNFGRFPYSKGRLTKEDHDIVNDAL
Newman DGQLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNFGRFPYSKGRLTKEDHDIVNDAL
USA300_FPR3757 DGQLMSDYKNNDLSKKISILKQTNHTEMNITVEQLVNFGRFPYSKGRLTKEDHDIVNDAL
************************************************************
COL DLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHAVQIMQTLKM
N315 DLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHAVQIMQTLKM
NCTC8325 DLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHAVQIMQTLKM
Newman DLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHAVQIMQTLKM
USA300_FPR3757 DLLQLQDIRNRNIKSLSGGQRQRAYIAMTIAQDTEYILLDEPLNNLDMKHAVQIMQTLKM
************************************************************
COL LAHKMNKAIVIVLHDINFASCYSDQIVALKNGQLVKSDLKDNVIQSSVLSDLYDMNIQIE
N315 LAHKMNKAIVIVLHDINFASCYSDQIVALKNGQLVKSDLKDNVIQSSVLSDLYDMNIQIE
NCTC8325 LAHKMNKAIVIVLHDINFASCYSDQIVALKNGQLVKSDLKDNVIQSSVLSDLYDMNIQIE
Newman LAHKMNKAIVIVLHDINFASCYSDQIVALKNGQLVKSDLKDNVIQSSVLSDLYDMNIQIE
USA300_FPR3757 LAHKMNKAIVIVLHDINFASCYSDQIVALKNGQLVKSDLKDNVIQSSVLSDLYDMNIQIE
************************************************************
COL HIRNQRICLYFKD
N315 HIRNQRICLYFKD
NCTC8325 HIRNQRICLYFKD
Newman HIRNQRICLYFKD
USA300_FPR3757 HIRNQRICLYFKD
*************