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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002641000
- symbol?: —
- synonym:
- description?: putative CHY zinc finger protein
- putative CHY zinc finger protein
- CHY zinc finger superfamily protein
- Zinc finger, CHY domain protein
- zinc finger CHY domain-containing protein
- Zinc finger protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3141669..3141983
- synteny block?: BlockID0018760
- occurrence?: in 79% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0715
08BA02176:
C248_0824
11819-97:
—
6850:
RSAU_000712
71193:
ST398NM01_2840
ECT-R 2:
—
ED133:
SAOV_0774c
ED98:
SAAV_0699
HO 5096 0412:
SAEMRSA15_06630
JH1:
SaurJH1_0778
JH9:
SaurJH9_0761
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_06700
M013:
—
MRSA252:
SAR0791
MSHR1132:
SAMSHR1132_06820
MSSA476:
SAS0702
Mu3:
SAHV_0734
Mu50:
SAV0737
MW2:
MW0699
RF122:
SAB0689c
ST398:
—
T0131:
SAT0131_00809
TCH60:
HMPREF0772_12447
TW20:
SATW20_08120
USA300_TCH1516:
USA300HOU_0763
VC40:
SAVC_03320
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSFNE
N315 MPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSFNE
NCTC8325 MPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSFNE
Newman MPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSFNE
************************************************************
COL KAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYFEI
N315 KAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYFEI
NCTC8325 KAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYFEI
Newman KAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYFEI
********************************************