Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002645000
- symbol?: —
- synonym:
- description?: EMYY motif lipoprotein
- EMYY motif lipoprotein
- lipoprotein, putative
- putative lipoprotein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3143665..3144556
- synteny block?: BlockID0018800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0718
08BA02176:
C248_0827
11819-97:
MS7_0790
6850:
RSAU_000715
71193:
ST398NM01_0816
ECT-R 2:
ECTR2_690
ED133:
SAOV_0777
ED98:
SAAV_0702
HO 5096 0412:
SAEMRSA15_06660
JH1:
SaurJH1_0781
JH9:
SaurJH9_0764
JKD6008:
SAA6008_00754
JKD6159:
SAA6159_00695
LGA251:
SARLGA251_06730
M013:
M013TW_0725
MRSA252:
SAR0794
MSHR1132:
SAMSHR1132_06850
MSSA476:
SAS0705
Mu3:
SAHV_0737
Mu50:
SAV0740
MW2:
MW0702
RF122:
SAB0692
ST398:
SAPIG0816
T0131:
SAT0131_00812
TCH60:
HMPREF0772_12443
TW20:
SATW20_08150
USA300_TCH1516:
USA300HOU_0767
VC40:
SAVC_03335
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKELQHVMDNIHLKEIDHL
N315 MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKELQHVMDNIHLKEIDHL
NCTC8325 MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKELQHVMDNIHLKEIDHL
Newman MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKELQHVMDNIHLKEIDHL
USA300_FPR3757 MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKELQHVMDNIHLKEIDHL
************************************************************
COL SKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDTMKVKKLKKEYMTLANEKK
N315 SKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDTMKVKKLKKEYMTLANEKK
NCTC8325 SKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDTMKVKKLKKEYMTLANEKK
Newman SKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDTMKVKKLKKEYMTLANEKK
USA300_FPR3757 SKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDTMKVKKLKKEYMTLANEKK
************************************************************
COL DAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESEIKLADNKSEATNLTTKLEHN
N315 DAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESEIKLADNKSEATNLTTKLEHN
NCTC8325 DAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESEIKLADNKSEATNLTTKLEHN
Newman DAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESEIKLADNKSEATNLTTKLEHN
USA300_FPR3757 DAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESEIKLADNKSEATNLTTKLEHN
************************************************************
COL NKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITDINQTNISDKHVNNARKNAIEMY
N315 NKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITDINQTNISDKHVNNARKNAIEMY
NCTC8325 NKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITDINQTNISDKHVNNARKNAIEMY
Newman NKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITDINQTNISDKHVNNARKNAIEMY
USA300_FPR3757 NKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITDINQTNISDKHVNNARKNAIEMY
************************************************************
COL YSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDITHGDKAFEKKLEKLEEK
N315 YSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDITHGDKAFEKKLEKLEEK
NCTC8325 YSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDITHGDKAFEKKLEKLEEK
Newman YSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDITHGDKAFEKKLEKLEEK
USA300_FPR3757 YSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDITHGDKAFEKKLEKLEEK
****************************************************