PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002770000
• symbol^?: —
• synonym:
• description^?: conserved cytoplasmic protein
• strand^?: -
• coordinates^?: 3243267..3243569
• synteny block^?: BlockID0019730
• occurrence^?: in 58% of 33 strains

⊟Orthologs

COL:
SACOL0849
N315:
SA0738
NCTC8325:
SAOUHSC_00806
Newman:
NWMN_0752
USA300_FPR3757:
SAUSA300_0767
04-02981:
SA2981_0761
08BA02176:
—
11819-97:
MS7_0833
6850:
RSAU_000760
71193:
—
ECT-R 2:
ECTR2_733
ED133:
—
ED98:
SAAV_0751
HO 5096 0412:
—
JH1:
SaurJH1_0823
JH9:
SaurJH9_0807
JKD6008:
SAA6008_00797
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_0803
Mu50:
SAV0807
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_00876
TCH60:
—
TW20:
SATW20_08570
USA300_TCH1516:
USA300HOU_0813
VC40:
SAVC_03555

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNNEELEMRLLLMKQSIEQLQEELAPNLKTRDLVLLRYMYSYKEINMLDSYLFQLATNKE
  N315            -------MRLLLMKQSIEQLQEELAPNLKTRDLVLLRYMYSYKEINMLDSYLFQLATNKE
  NCTC8325        MNNEELEMRLLLMKQSIEQLQEELAPNLKTRDLVLLRYMYSYKEINMLDSYLFQLATNKE
  Newman          MNNEELEMRLLLMKQSIEQLQEELAPNLKTRDLVLLRYMYSYKEINMLDSYLFQLATNKE
  USA300_FPR3757  MNNEELEMRLLLMKQSIEQLQEELAPNLKTRDLVLLRYMYSYKEINMLDSYLFQLATNKE
                         *****************************************************
  
  COL             QITKKQFKTKLENIREVPEIPIRQVNDILEGYKNSELYVELINSILK
  N315            QITKKQFKTKLENIREVPEIPIRQVNDILEGYKNSELYVELINSILK
  NCTC8325        QITKKQFKTKLENIREVPEIPIRQVNDILEGYKNSELYVELINSILK
  Newman          QITKKQFKTKLENIREVPEIPIRQVNDILEGYKNSELYVELINSILK
  USA300_FPR3757  QITKKQFKTKLENIREVPEIPIRQVNDILEGYKNSELYVELINSILK
                  ***********************************************